Analysis of interatomic Contacts of Structural Units in PDB entry:
6NQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NQ0 entry

There are 2 chains in PDB entry 6NQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 39TRP 701
B
 ALA 39TRP 701
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 6NQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 59Right-handed alpha
Helix 2
AA2
A
69 78Right-handed alpha
Helix 3
AA3
A
82 96Right-handed alpha
Helix 4
AA4
A
97 99Right-handed 310
Helix 5
AA5
A
123 132Right-handed alpha
Helix 6
AA6
A
135 146Right-handed alpha
Helix 7
AA7
A
148 155Right-handed alpha
Helix 8
AA8
A
155 178Right-handed alpha
Helix 9
AA9
A
185 189Right-handed 310
Helix 10
AB1
A
190 191Right-handed 310
Helix 11
AB2
A
192 199Right-handed alpha
Helix 12
AB3
A
201 211Right-handed alpha
Helix 13
AB4
A
212 215Right-handed 310
Helix 14
AB5
A
216 238Right-handed alpha
Helix 15
AB6
A
257 269Right-handed alpha
Helix 16
AB7
A
278 283Right-handed alpha
Helix 17
AB8
A
285 287Right-handed 310
Helix 18
AB9
A
288 299Right-handed alpha
Helix 19
AC1
A
302 343Right-handed alpha
Helix 20
AC2
A
358 369Right-handed alpha
Helix 21
AC3
A
373 385Right-handed alpha
Helix 22
AC4
A
392 400Right-handed alpha
Helix 23
AC5
A
401 405Right-handed 310
Helix 24
AC6
A
419 430Right-handed alpha
Helix 25
AC7
A
433 454Right-handed alpha
Helix 26
AC8
A
466 492Right-handed alpha
Helix 27
AC9
A
492 497Right-handed alpha
Helix 28
AD1
A
499 523Right-handed alpha
Helix 29
AD2
A
540 555Right-handed alpha
Helix 30
AD3
A
557 562Right-handed alpha
Helix 31
AD4
A
562 575Right-handed alpha
Helix 32
AD5
A
575 583Right-handed alpha
Helix 33
AD6
A
583 599Right-handed alpha
Helix 34
AD7
A
630 634Right-handed 310
Helix 35
AD8
A
638 646Right-handed alpha
Helix 36
AD9
A
646 651Right-handed alpha
Helix 37
AE1
A
654 665Right-handed alpha
Helix 38
AE2
A
667 669Right-handed 310
Helix 39
AE3
A
670 681Right-handed alpha
Helix 40
AE4
A
684 700Right-handed alpha
Helix 41
AE5
B
40 59Right-handed alpha
Helix 42
AE6
B
69 78Right-handed alpha
Helix 43
AE7
B
82 96Right-handed alpha
Helix 44
AE8
B
97 99Right-handed 310
Helix 45
AE9
B
123 132Right-handed alpha
Helix 46
AF1
B
135 146Right-handed alpha
Helix 47
AF2
B
148 155Right-handed alpha
Helix 48
AF3
B
155 178Right-handed alpha
Helix 49
AF4
B
185 189Right-handed 310
Helix 50
AF5
B
190 191Right-handed 310
Helix 51
AF6
B
192 199Right-handed alpha
Helix 52
AF7
B
201 211Right-handed alpha
Helix 53
AF8
B
212 215Right-handed 310
Helix 54
AF9
B
216 238Right-handed alpha
Helix 55
AG1
B
257 269Right-handed alpha
Helix 56
AG2
B
278 283Right-handed alpha
Helix 57
AG3
B
285 287Right-handed 310
Helix 58
AG4
B
288 299Right-handed alpha
Helix 59
AG5
B
302 343Right-handed alpha
Helix 60
AG6
B
358 369Right-handed alpha
Helix 61
AG7
B
373 385Right-handed alpha
Helix 62
AG8
B
392 400Right-handed alpha
Helix 63
AG9
B
401 405Right-handed 310
Helix 64
AH1
B
419 430Right-handed alpha
Helix 65
AH2
B
433 454Right-handed alpha
Helix 66
AH3
B
466 492Right-handed alpha
Helix 67
AH4
B
492 497Right-handed alpha
Helix 68
AH5
B
499 523Right-handed alpha
Helix 69
AH6
B
540 555Right-handed alpha
Helix 70
AH7
B
557 562Right-handed alpha
Helix 71
AH8
B
562 575Right-handed alpha
Helix 72
AH9
B
575 583Right-handed alpha
Helix 73
AI1
B
583 599Right-handed alpha
Helix 74
AI2
B
630 634Right-handed 310
Helix 75
AI3
B
638 646Right-handed alpha
Helix 76
AI4
B
646 651Right-handed alpha
Helix 77
AI5
B
654 665Right-handed alpha
Helix 78
AI6
B
667 669Right-handed 310
Helix 79
AI7
B
670 681Right-handed alpha
Helix 80
AI8
B
684 700Right-handed alpha
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There are no sheets in PDB entry 6NQ0
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