Analysis of interatomic Contacts of Structural Units in PDB entry:
6NQ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NQ1 entry

There are 2 chains in PDB entry 6NQ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 39TRP 701
B
 ALA 39TRP 701
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 6NQ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 58Right-handed alpha
Helix 2
AA2
A
69 78Right-handed alpha
Helix 3
AA3
A
79 94Right-handed alpha
Helix 4
AA4
A
95 100Right-handed 310
Helix 5
AA5
A
123 147Right-handed alpha
Helix 6
AA6
A
148 155Right-handed alpha
Helix 7
AA7
A
155 178Right-handed alpha
Helix 8
AA8
A
185 190Right-handed 310
Helix 9
AA9
A
191 198Right-handed alpha
Helix 10
AB1
A
201 212Right-handed alpha
Helix 11
AB2
A
212 239Right-handed alpha
Helix 12
AB3
A
257 270Right-handed alpha
Helix 13
AB4
A
278 285Right-handed alpha
Helix 14
AB5
A
288 300Right-handed alpha
Helix 15
AB6
A
301 313Right-handed alpha
Helix 16
AB7
A
317 343Right-handed alpha
Helix 17
AB8
A
358 369Right-handed alpha
Helix 18
AB9
A
372 386Right-handed alpha
Helix 19
AC1
A
392 398Right-handed alpha
Helix 20
AC2
A
399 405Right-handed 310
Helix 21
AC3
A
418 428Right-handed alpha
Helix 22
AC4
A
433 459Right-handed alpha
Helix 23
AC5
A
466 489Right-handed alpha
Helix 24
AC6
A
492 498Right-handed alpha
Helix 25
AC7
A
499 523Right-handed alpha
Helix 26
AC8
A
540 553Right-handed alpha
Helix 27
AC9
A
554 558Right-handed 310
Helix 28
AD1
A
565 577Right-handed alpha
Helix 29
AD2
A
579 601Right-handed alpha
Helix 30
AD3
A
630 634Right-handed 310
Helix 31
AD4
A
638 651Right-handed alpha
Helix 32
AD5
A
655 667Right-handed alpha
Helix 33
AD6
A
670 682Right-handed alpha
Helix 34
AD7
A
683 698Right-handed alpha
Helix 35
AD8
B
40 58Right-handed alpha
Helix 36
AD9
B
69 78Right-handed alpha
Helix 37
AE1
B
79 94Right-handed alpha
Helix 38
AE2
B
95 100Right-handed 310
Helix 39
AE3
B
123 147Right-handed alpha
Helix 40
AE4
B
148 155Right-handed alpha
Helix 41
AE5
B
155 178Right-handed alpha
Helix 42
AE6
B
185 190Right-handed 310
Helix 43
AE7
B
191 198Right-handed alpha
Helix 44
AE8
B
201 212Right-handed alpha
Helix 45
AE9
B
212 239Right-handed alpha
Helix 46
AF1
B
257 270Right-handed alpha
Helix 47
AF2
B
278 285Right-handed alpha
Helix 48
AF3
B
288 300Right-handed alpha
Helix 49
AF4
B
301 313Right-handed alpha
Helix 50
AF5
B
317 343Right-handed alpha
Helix 51
AF6
B
358 369Right-handed alpha
Helix 52
AF7
B
372 386Right-handed alpha
Helix 53
AF8
B
392 398Right-handed alpha
Helix 54
AF9
B
399 405Right-handed 310
Helix 55
AG1
B
418 428Right-handed alpha
Helix 56
AG2
B
433 459Right-handed alpha
Helix 57
AG3
B
466 489Right-handed alpha
Helix 58
AG4
B
492 498Right-handed alpha
Helix 59
AG5
B
499 523Right-handed alpha
Helix 60
AG6
B
540 553Right-handed alpha
Helix 61
AG7
B
554 558Right-handed 310
Helix 62
AG8
B
565 577Right-handed alpha
Helix 63
AG9
B
579 601Right-handed alpha
Helix 64
AH1
B
630 634Right-handed 310
Helix 65
AH2
B
638 651Right-handed alpha
Helix 66
AH3
B
655 667Right-handed alpha
Helix 67
AH4
B
670 682Right-handed alpha
Helix 68
AH5
B
683 698Right-handed alpha
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There are no sheets in PDB entry 6NQ1
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