Analysis of interatomic Contacts of Structural Units in PDB entry:
6NR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NR6 entry

There are 2 chains in PDB entry 6NR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 254
B
 MET 1GLU 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6NR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 7Right-handed alpha
Helix 2
AA2
A
23 38Right-handed alpha
Helix 3
AA3
A
50 52Right-handed 310
Helix 4
AA4
A
59 69Right-handed alpha
Helix 5
AA5
A
80 82Right-handed 310
Helix 6
AA6
A
95 98Right-handed 310
Helix 7
AA7
A
99 104Right-handed alpha
Helix 8
AA8
A
133 137Right-handed 310
Helix 9
AA9
A
140 151Right-handed alpha
Helix 10
AB1
A
182 192Right-handed alpha
Helix 11
AB2
A
217 220Right-handed 310
Helix 12
AB3
A
225 240Right-handed alpha
Helix 13
AB4
B
2 7Right-handed alpha
Helix 14
AB5
B
23 38Right-handed alpha
Helix 15
AB6
B
50 52Right-handed 310
Helix 16
AB7
B
59 69Right-handed alpha
Helix 17
AB8
B
80 82Right-handed 310
Helix 18
AB9
B
95 98Right-handed 310
Helix 19
AC1
B
99 104Right-handed alpha
Helix 20
AC2
B
133 137Right-handed 310
Helix 21
AC3
B
140 154Right-handed alpha
Helix 22
AC4
B
182 192Right-handed alpha
Helix 23
AC5
B
217 220Right-handed 310
Helix 24
AC6
B
221 225Right-handed 310
Helix 25
AC7
B
226 239Right-handed alpha
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There are 8 sheets in PDB entry 6NR6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
73 78anti-parallel
Strand 3
A
44 48parallel
Strand 4
A
54 58anti-parallel
Strand 5
A
16 17parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
214 215anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 132first strand
Strand 2
A
121 124anti-parallel
Strand 3
A
174 178anti-parallel
Strand 4
A
84 93anti-parallel
Strand 5
A
159 162anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 132first strand
Strand 2
A
121 124anti-parallel
Strand 3
A
174 178anti-parallel
Strand 4
A
84 93anti-parallel
Strand 5
A
201 205anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 12first strand
Strand 2
B
73 78anti-parallel
Strand 3
B
44 48parallel
Strand 4
B
54 58anti-parallel
Strand 5
B
16 17parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 40first strand
Strand 2
B
214 215anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 88first strand
Strand 2
B
201 205anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 132first strand
Strand 2
B
121 124anti-parallel
Strand 3
B
174 178anti-parallel
Strand 4
B
90 93anti-parallel
Strand 5
B
159 161anti-parallel
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