Analysis of interatomic Contacts of Structural Units in PDB entry:
6NRY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NRY entry

There is 1 chain in PDB entry 6NRY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 105ASN 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6NRY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
110 121Right-handed alpha
Helix 2
AA2
A
122 125Right-handed 310
Helix 3
AA3
A
154 169Right-handed alpha
Helix 4
AA4
A
180 193Right-handed alpha
Helix 5
AA5
A
194 198Right-handed 310
Helix 6
AA6
A
231 238Right-handed alpha
Helix 7
AA7
A
243 247Right-handed 310
Helix 8
AA8
A
312 317Right-handed 310
Helix 9
AA9
A
320 334Right-handed alpha
Helix 10
AB1
A
338 350Right-handed alpha
Helix 11
AB2
A
355 359Right-handed 310
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There are 2 sheets in PDB entry 6NRY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 177first strand
Strand 2
A
136 142parallel
Strand 3
A
203 212parallel
Strand 4
A
215 217anti-parallel
Strand 5
A
228 230anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 177first strand
Strand 2
A
136 142parallel
Strand 3
A
203 212parallel
Strand 4
A
251 258parallel
Strand 5
A
300 305parallel
Strand 6
A
361 363anti-parallel
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