Analysis of interatomic Contacts of Structural Units in PDB entry:
6NS3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NS3 entry

There is 1 chain in PDB entry 6NS3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 101ILE 745
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6NS3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
105 118Right-handed alpha
Helix 2
AA2
A
133 141Right-handed 310
Helix 3
AA3
A
142 146Right-handed 310
Helix 4
AA4
A
163 176Right-handed alpha
Helix 5
AA5
A
196 206Right-handed alpha
Helix 6
AA6
A
232 236Right-handed 310
Helix 7
AA7
A
241 252Right-handed alpha
Helix 8
AA8
A
262 276Right-handed alpha
Helix 9
AA9
A
278 288Right-handed alpha
Helix 10
AB1
A
298 304Right-handed alpha
Helix 11
AB2
A
384 404Right-handed alpha
Helix 12
AB3
A
411 426Right-handed alpha
Helix 13
AB4
A
430 437Right-handed alpha
Helix 14
AB5
A
438 441Right-handed 310
Helix 15
AB6
A
442 453Right-handed alpha
Helix 16
AB7
A
453 458Right-handed alpha
Helix 17
AB8
A
458 463Right-handed alpha
Helix 18
AB9
A
473 476Right-handed 310
Helix 19
AC1
A
477 489Right-handed alpha
Helix 20
AC2
A
496 504Right-handed alpha
Helix 21
AC3
A
507 511Right-handed 310
Helix 22
AC4
A
514 518Right-handed 310
Helix 23
AC5
A
519 542Right-handed alpha
Helix 24
AC6
A
546 552Right-handed alpha
Helix 25
AC7
A
555 566Right-handed alpha
Helix 26
AC8
A
577 593Right-handed alpha
Helix 27
AC9
A
593 601Right-handed alpha
Helix 28
AD1
A
602 609Right-handed alpha
Helix 29
AD2
A
624 629Right-handed alpha
Helix 30
AD3
A
632 640Right-handed alpha
Helix 31
AD4
A
644 646Right-handed 310
Helix 32
AD5
A
647 664Right-handed alpha
Helix 33
AD6
A
667 670Right-handed 310
Helix 34
AD7
A
671 679Right-handed alpha
Helix 35
AD8
A
689 691Right-handed 310
Helix 36
AD9
A
695 723Right-handed alpha
Helix 37
AE1
A
735 739Right-handed 310
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There are 3 sheets in PDB entry 6NS3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
291 295anti-parallel
Strand 3
A
336 341anti-parallel
Strand 4
A
347 353anti-parallel
Strand 5
A
365 367anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 332first strand
Strand 2
A
311 319anti-parallel
Strand 3
A
468 469parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
680 681first strand
Strand 2
A
686 687anti-parallel
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