Analysis of interatomic Contacts of Structural Units in PDB entry:
6NS5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NS5 entry

There are 2 chains in PDB entry 6NS5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 9PRO 736
B
 VAL 8THR 644
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 73 helices in PDB entry 6NS5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 21Right-handed alpha
Helix 2
AA2
A
26 30Right-handed 310
Helix 3
AA3
A
36 48Right-handed alpha
Helix 4
AA4
A
73 99Right-handed alpha
Helix 5
AA5
A
110 118Right-handed alpha
Helix 6
AA6
A
174 179Right-handed alpha
Helix 7
AA7
A
196 207Right-handed alpha
Helix 8
AA8
A
227 231Right-handed 310
Helix 9
AA9
A
232 236Right-handed 310
Helix 10
AB1
A
241 252Right-handed alpha
Helix 11
AB2
A
262 276Right-handed alpha
Helix 12
AB3
A
278 288Right-handed alpha
Helix 13
AB4
A
298 303Right-handed alpha
Helix 14
AB5
A
380 383Right-handed 310
Helix 15
AB6
A
384 405Right-handed alpha
Helix 16
AB7
A
411 426Right-handed alpha
Helix 17
AB8
A
430 437Right-handed alpha
Helix 18
AB9
A
438 441Right-handed 310
Helix 19
AC1
A
442 453Right-handed alpha
Helix 20
AC2
A
453 458Right-handed alpha
Helix 21
AC3
A
458 463Right-handed alpha
Helix 22
AC4
A
477 489Right-handed alpha
Helix 23
AC5
A
492 495Right-handed 310
Helix 24
AC6
A
496 505Right-handed alpha
Helix 25
AC7
A
519 541Right-handed alpha
Helix 26
AC8
A
546 552Right-handed alpha
Helix 27
AC9
A
555 566Right-handed alpha
Helix 28
AD1
A
577 593Right-handed alpha
Helix 29
AD2
A
593 601Right-handed alpha
Helix 30
AD3
A
602 608Right-handed alpha
Helix 31
AD4
A
609 613Right-handed 310
Helix 32
AD5
A
624 630Right-handed alpha
Helix 33
AD6
A
632 639Right-handed alpha
Helix 34
AD7
A
647 663Right-handed alpha
Helix 35
AD8
A
671 683Right-handed alpha
Helix 36
AD9
A
695 723Right-handed alpha
Helix 37
AE1
B
10 21Right-handed alpha
Helix 38
AE2
B
26 30Right-handed 310
Helix 39
AE3
B
36 48Right-handed alpha
Helix 40
AE4
B
74 99Right-handed alpha
Helix 41
AE5
B
110 118Right-handed alpha
Helix 42
AE6
B
172 179Right-handed alpha
Helix 43
AE7
B
196 207Right-handed alpha
Helix 44
AE8
B
226 231Right-handed 310
Helix 45
AE9
B
232 236Right-handed 310
Helix 46
AF1
B
241 252Right-handed alpha
Helix 47
AF2
B
262 276Right-handed alpha
Helix 48
AF3
B
278 288Right-handed alpha
Helix 49
AF4
B
298 303Right-handed alpha
Helix 50
AF5
B
380 383Right-handed 310
Helix 51
AF6
B
384 405Right-handed alpha
Helix 52
AF7
B
411 426Right-handed alpha
Helix 53
AF8
B
430 437Right-handed alpha
Helix 54
AF9
B
438 441Right-handed 310
Helix 55
AG1
B
442 453Right-handed alpha
Helix 56
AG2
B
453 458Right-handed alpha
Helix 57
AG3
B
458 463Right-handed alpha
Helix 58
AG4
B
473 476Right-handed 310
Helix 59
AG5
B
477 490Right-handed alpha
Helix 60
AG6
B
492 495Right-handed 310
Helix 61
AG7
B
496 505Right-handed alpha
Helix 62
AG8
B
519 541Right-handed alpha
Helix 63
AG9
B
546 552Right-handed alpha
Helix 64
AH1
B
555 566Right-handed alpha
Helix 65
AH2
B
577 593Right-handed alpha
Helix 66
AH3
B
593 601Right-handed alpha
Helix 67
AH4
B
602 608Right-handed alpha
Helix 68
AH5
B
609 613Right-handed 310
Helix 69
AH6
B
624 630Right-handed alpha
Helix 70
AH7
B
632 639Right-handed alpha
Helix 71
AH8
B
647 663Right-handed alpha
Helix 72
AH9
B
672 683Right-handed alpha
Helix 73
AI1
B
696 723Right-handed alpha
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There are 7 sheets in PDB entry 6NS5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
59 63anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
291 295anti-parallel
Strand 3
A
336 341anti-parallel
Strand 4
A
347 353anti-parallel
Strand 5
A
365 367anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 331first strand
Strand 2
A
312 319anti-parallel
Strand 3
A
468 469parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 53first strand
Strand 2
B
59 63anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 73first strand
Strand 2
B
184 186parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 260first strand
Strand 2
B
291 295anti-parallel
Strand 3
B
336 341anti-parallel
Strand 4
B
347 353anti-parallel
Strand 5
B
365 367anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
322 331first strand
Strand 2
B
312 319anti-parallel
Strand 3
B
468 469parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il