Analysis of interatomic Contacts of Structural Units in PDB entry:
6NSI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NSI entry

There is 1 chain in PDB entry 6NSI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 40GLU 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6NSI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 59Right-handed alpha
Helix 2
AA2
A
60 62Right-handed 310
Helix 3
AA3
A
73 77Right-handed 310
Helix 4
AA4
A
82 90Right-handed alpha
Helix 5
AA5
A
103 111Right-handed alpha
Helix 6
AA6
A
119 125Right-handed alpha
Helix 7
AA7
A
141 144Right-handed 310
Helix 8
AA8
A
145 164Right-handed alpha
Helix 9
AA9
A
167 194Right-handed alpha
Helix 10
AB1
A
195 196Right-handed 310
Helix 11
AB2
A
197 201Right-handed 310
Helix 12
AB3
A
210 218Right-handed alpha
Helix 13
AB4
A
220 227Right-handed alpha
Helix 14
AB5
A
228 231Right-handed 310
Helix 15
AB6
A
246 261Right-handed alpha
Helix 16
AB7
A
273 282Right-handed alpha
Helix 17
AB8
A
304 320Right-handed alpha
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There are 4 sheets in PDB entry 6NSI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
42 45parallel
Strand 3
A
93 95parallel
Strand 4
A
116 118parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
137 138anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
233 234parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 265first strand
Strand 2
A
290 291parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il