Analysis of interatomic Contacts of Structural Units in PDB entry:
6NT5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NT5 entry

There are 2 chains in PDB entry 6NT5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4GLU 336
B
 SER 4GLU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6NT5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 33Right-handed alpha
Helix 2
AA2
A
45 70Right-handed alpha
Helix 3
AA3
A
82 89Right-handed alpha
Helix 4
AA4
A
91 105Right-handed alpha
Helix 5
AA5
A
119 134Right-handed alpha
Helix 6
AA6
A
140 149Right-handed alpha
Helix 7
AA7
A
156 167Right-handed alpha
Helix 8
AA8
A
167 172Right-handed alpha
Helix 9
AA9
A
174 183Right-handed alpha
Helix 10
AB1
A
183 188Right-handed alpha
Helix 11
AB2
A
263 273Right-handed alpha
Helix 12
AB3
A
274 278Right-handed 310
Helix 13
AB4
A
280 301Right-handed alpha
Helix 14
AB5
A
324 336Right-handed alpha
Helix 15
AB6
B
17 33Right-handed alpha
Helix 16
AB7
B
45 70Right-handed alpha
Helix 17
AB8
B
82 89Right-handed alpha
Helix 18
AB9
B
91 105Right-handed alpha
Helix 19
AC1
B
119 134Right-handed alpha
Helix 20
AC2
B
140 149Right-handed alpha
Helix 21
AC3
B
156 167Right-handed alpha
Helix 22
AC4
B
167 172Right-handed alpha
Helix 23
AC5
B
174 183Right-handed alpha
Helix 24
AC6
B
183 188Right-handed alpha
Helix 25
AC7
B
263 273Right-handed alpha
Helix 26
AC8
B
274 278Right-handed 310
Helix 27
AC9
B
280 301Right-handed alpha
Helix 28
AD1
B
324 336Right-handed alpha
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There are 2 sheets in PDB entry 6NT5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 223first strand
Strand 2
A
244 247anti-parallel
Strand 3
A
255 261anti-parallel
Strand 4
A
198 203parallel
Strand 5
A
309 314parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 223first strand
Strand 2
B
244 247anti-parallel
Strand 3
B
255 261anti-parallel
Strand 4
B
198 203parallel
Strand 5
B
309 314parallel
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