Analysis of interatomic Contacts of Structural Units in PDB entry:
6NTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NTE entry

There are 2 chains in PDB entry 6NTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 35PHE 561
B
 LYS 35PHE 561
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 6NTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 68Right-handed alpha
Helix 2
AA2
A
88 91Right-handed 310
Helix 3
AA3
A
92 112Right-handed alpha
Helix 4
AA4
A
127 138Right-handed alpha
Helix 5
AA5
A
199 211Right-handed alpha
Helix 6
AA6
A
217 221Right-handed 310
Helix 7
AA7
A
225 246Right-handed alpha
Helix 8
AA8
A
248 253Right-handed alpha
Helix 9
AA9
A
254 268Right-handed alpha
Helix 10
AB1
A
272 286Right-handed alpha
Helix 11
AB2
A
290 301Right-handed alpha
Helix 12
AB3
A
314 321Right-handed alpha
Helix 13
AB4
A
322 334Right-handed alpha
Helix 14
AB5
A
348 353Right-handed alpha
Helix 15
AB6
A
413 423Right-handed alpha
Helix 16
AB7
A
449 458Right-handed alpha
Helix 17
AB8
A
487 491Right-handed 310
Helix 18
AB9
A
492 497Right-handed 310
Helix 19
AC1
A
517 528Right-handed alpha
Helix 20
AC2
A
537 547Right-handed alpha
Helix 21
AC3
A
549 553Right-handed 310
Helix 22
AC4
B
47 50Right-handed 310
Helix 23
AC5
B
51 68Right-handed alpha
Helix 24
AC6
B
88 91Right-handed 310
Helix 25
AC7
B
92 112Right-handed alpha
Helix 26
AC8
B
127 138Right-handed alpha
Helix 27
AC9
B
199 211Right-handed alpha
Helix 28
AD1
B
217 221Right-handed 310
Helix 29
AD2
B
225 246Right-handed alpha
Helix 30
AD3
B
248 253Right-handed alpha
Helix 31
AD4
B
254 268Right-handed alpha
Helix 32
AD5
B
272 286Right-handed alpha
Helix 33
AD6
B
290 301Right-handed alpha
Helix 34
AD7
B
314 321Right-handed alpha
Helix 35
AD8
B
322 334Right-handed alpha
Helix 36
AD9
B
348 353Right-handed alpha
Helix 37
AE1
B
413 423Right-handed alpha
Helix 38
AE2
B
449 458Right-handed alpha
Helix 39
AE3
B
487 491Right-handed 310
Helix 40
AE4
B
492 497Right-handed 310
Helix 41
AE5
B
517 528Right-handed alpha
Helix 42
AE6
B
537 547Right-handed alpha
Helix 43
AE7
B
549 553Right-handed 310
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There are 6 sheets in PDB entry 6NTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 76first strand
Strand 2
A
37 42parallel
Strand 3
A
116 121parallel
Strand 4
A
141 145parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 382first strand
Strand 2
A
391 395anti-parallel
Strand 3
A
480 485anti-parallel
Strand 4
A
465 468parallel
Strand 5
A
431 434parallel
Strand 6
A
403 411parallel
Strand 7
A
502 506anti-parallel
Strand 8
A
511 514anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 448first strand
Strand 2
A
471 472parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 78first strand
Strand 2
B
37 45parallel
Strand 3
B
116 121parallel
Strand 4
B
141 145parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
380 382first strand
Strand 2
B
391 395anti-parallel
Strand 3
B
480 485anti-parallel
Strand 4
B
465 468parallel
Strand 5
B
431 434parallel
Strand 6
B
403 411parallel
Strand 7
B
502 506anti-parallel
Strand 8
B
511 514anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
447 448first strand
Strand 2
B
471 472parallel
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