Analysis of interatomic Contacts of Structural Units in PDB entry:
6NTS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NTS entry

There are 3 chains in PDB entry 6NTS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7ALA 589
B
 GLN 68LYS 428
C
 ASP 2PHE 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 6NTS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 17Right-handed alpha
Helix 2
AA2
A
24 43Right-handed alpha
Helix 3
AA3
A
43 59Right-handed alpha
Helix 4
AA4
A
62 76Right-handed alpha
Helix 5
AA5
A
84 88Right-handed 310
Helix 6
AA6
A
89 98Right-handed alpha
Helix 7
AA7
A
101 116Right-handed alpha
Helix 8
AA8
A
120 137Right-handed alpha
Helix 9
AA9
A
140 148Right-handed alpha
Helix 10
AB1
A
150 155Right-handed alpha
Helix 11
AB2
A
162 175Right-handed alpha
Helix 12
AB3
A
178 193Right-handed alpha
Helix 13
AB4
A
197 214Right-handed alpha
Helix 14
AB5
A
217 233Right-handed alpha
Helix 15
AB6
A
236 244Right-handed alpha
Helix 16
AB7
A
244 253Right-handed alpha
Helix 17
AB8
A
257 266Right-handed alpha
Helix 18
AB9
A
266 275Right-handed alpha
Helix 19
AC1
A
275 292Right-handed alpha
Helix 20
AC2
A
296 312Right-handed alpha
Helix 21
AC3
A
317 326Right-handed alpha
Helix 22
AC4
A
326 335Right-handed alpha
Helix 23
AC5
A
338 350Right-handed alpha
Helix 24
AC6
A
351 353Right-handed 310
Helix 25
AC7
A
357 374Right-handed alpha
Helix 26
AC8
A
377 387Right-handed alpha
Helix 27
AC9
A
388 391Right-handed 310
Helix 28
AD1
A
396 412Right-handed alpha
Helix 29
AD2
A
416 435Right-handed alpha
Helix 30
AD3
A
435 443Right-handed alpha
Helix 31
AD4
A
443 452Right-handed alpha
Helix 32
AD5
A
455 474Right-handed alpha
Helix 33
AD6
A
474 481Right-handed alpha
Helix 34
AD7
A
481 489Right-handed alpha
Helix 35
AD8
A
490 492Right-handed 310
Helix 36
AD9
A
494 513Right-handed alpha
Helix 37
AE1
A
513 529Right-handed alpha
Helix 38
AE2
A
533 548Right-handed alpha
Helix 39
AE3
A
549 551Right-handed 310
Helix 40
AE4
A
552 569Right-handed alpha
Helix 41
AE5
A
572 587Right-handed alpha
Helix 42
AE6
B
69 76Right-handed alpha
Helix 43
AE7
B
77 81Right-handed 310
Helix 44
AE8
B
91 111Right-handed alpha
Helix 45
AE9
B
116 132Right-handed alpha
Helix 46
AF1
B
155 171Right-handed alpha
Helix 47
AF2
B
176 181Right-handed alpha
Helix 48
AF3
B
185 194Right-handed alpha
Helix 49
AF4
B
195 198Right-handed 310
Helix 50
AF5
B
200 218Right-handed alpha
Helix 51
AF6
B
221 238Right-handed alpha
Helix 52
AF7
B
245 257Right-handed alpha
Helix 53
AF8
B
258 260Right-handed 310
Helix 54
AF9
B
265 275Right-handed alpha
Helix 55
AG1
B
276 282Right-handed 310
Helix 56
AG2
B
284 287Right-handed 310
Helix 57
AG3
B
288 301Right-handed alpha
Helix 58
AG4
B
303 305Right-handed 310
Helix 59
AG5
B
306 317Right-handed alpha
Helix 60
AG6
B
322 337Right-handed alpha
Helix 61
AG7
B
341 362Right-handed alpha
Helix 62
AG8
B
364 373Right-handed alpha
Helix 63
AG9
B
374 376Right-handed 310
Helix 64
AH1
B
377 386Right-handed alpha
Helix 65
AH2
B
391 402Right-handed alpha
Helix 66
AH3
B
408 425Right-handed alpha
Helix 67
AH4
C
3 19Right-handed alpha
Helix 68
AH5
C
24 40Right-handed alpha
Helix 69
AH6
C
61 73Right-handed alpha
Helix 70
AH7
C
92 107Right-handed alpha
Helix 71
AH8
C
120 127Right-handed alpha
Helix 72
AH9
C
128 138Right-handed alpha
Helix 73
AI1
C
140 151Right-handed alpha
Helix 74
AI2
C
176 183Right-handed alpha
Helix 75
AI3
C
193 201Right-handed alpha
Helix 76
AI4
C
221 233Right-handed alpha
Helix 77
AI5
C
264 268Right-handed 310
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There are 3 sheets in PDB entry 6NTS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 48first strand
Strand 2
C
156 159parallel
Strand 3
C
163 166anti-parallel
Strand 4
C
236 239parallel
Strand 5
C
256 259parallel
Strand 6
C
248 251anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 113first strand
Strand 2
C
80 82parallel
Strand 3
C
52 55parallel
Strand 4
C
273 278anti-parallel
Strand 5
C
284 289anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
202 203first strand
Strand 2
C
218 220parallel
Strand 3
C
210 211anti-parallel
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