Analysis of interatomic Contacts of Structural Units in PDB entry:
6NTZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NTZ entry

There is 1 chain in PDB entry 6NTZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 31MET 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6NTZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 73Right-handed 310
Helix 2
AA2
A
74 89Right-handed alpha
Helix 3
AA3
A
101 113Right-handed 310
Helix 4
AA4
A
128 137Right-handed alpha
Helix 5
AA5
A
140 153Right-handed alpha
Helix 6
AA6
A
154 169Right-handed alpha
Helix 7
AA7
A
190 205Right-handed alpha
Helix 8
AA8
A
205 210Right-handed alpha
Helix 9
AA9
A
228 233Right-handed 310
Helix 10
AB1
A
273 291Right-handed alpha
Helix 11
AB2
A
333 337Right-handed 310
Helix 12
AB3
A
388 397Right-handed alpha
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There are 6 sheets in PDB entry 6NTZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
46 53anti-parallel
Strand 3
A
262 271anti-parallel
Strand 4
A
250 259anti-parallel
Strand 5
A
237 238anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
46 53anti-parallel
Strand 3
A
262 271anti-parallel
Strand 4
A
250 259anti-parallel
Strand 5
A
242 246anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
125 127anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
A
222 225anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 298first strand
Strand 2
A
325 330anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 343first strand
Strand 2
A
357 365anti-parallel
Strand 3
A
368 377anti-parallel
Strand 4
A
316 320anti-parallel
Strand 5
A
305 310anti-parallel
Strand 6
A
348 349parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il