Analysis of interatomic Contacts of Structural Units in PDB entry:
6NUS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NUS entry

There are 2 chains in PDB entry 6NUS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 118PRO 919
B
 ARG 80ALA 191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6NUS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 133Right-handed alpha
Helix 2
AA2
A
139 149Right-handed alpha
Helix 3
AA3
A
153 159Right-handed 310
Helix 4
AA4
A
170 176Right-handed alpha
Helix 5
AA5
A
178 199Right-handed alpha
Helix 6
AA6
A
234 242Right-handed alpha
Helix 7
AA7
A
243 245Right-handed 310
Helix 8
AA8
A
251 256Right-handed 310
Helix 9
AA9
A
275 287Right-handed alpha
Helix 10
AB1
A
297 301Right-handed 310
Helix 11
AB2
A
303 318Right-handed alpha
Helix 12
AB3
A
319 321Right-handed 310
Helix 13
AB4
A
367 376Right-handed alpha
Helix 14
AB5
A
378 383Right-handed alpha
Helix 15
AB6
A
416 425Right-handed alpha
Helix 16
AB7
A
465 479Right-handed alpha
Helix 17
AB8
A
489 493Right-handed 310
Helix 18
AB9
A
505 509Right-handed 310
Helix 19
AC1
A
512 517Right-handed alpha
Helix 20
AC2
A
520 531Right-handed alpha
Helix 21
AC3
A
561 581Right-handed alpha
Helix 22
AC4
A
596 607Right-handed alpha
Helix 23
AC5
A
627 639Right-handed alpha
Helix 24
AC6
A
640 642Right-handed 310
Helix 25
AC7
A
647 663Right-handed alpha
Helix 26
AC8
A
686 709Right-handed alpha
Helix 27
AC9
A
711 715Right-handed 310
Helix 28
AD1
A
717 729Right-handed alpha
Helix 29
AD2
A
738 752Right-handed alpha
Helix 30
AD3
A
768 772Right-handed alpha
Helix 31
AD4
A
778 790Right-handed alpha
Helix 32
AD5
A
795 799Right-handed 310
Helix 33
AD6
A
833 840Right-handed alpha
Helix 34
AD7
A
855 867Right-handed alpha
Helix 35
AD8
A
868 872Right-handed 310
Helix 36
AD9
A
874 891Right-handed alpha
Helix 37
AE1
A
910 915Right-handed alpha
Helix 38
AE2
A
916 918Right-handed 310
Helix 39
AE3
B
81 99Right-handed alpha
Helix 40
AE4
B
100 109Right-handed alpha
Helix 41
AE5
B
120 125Right-handed alpha
Helix 42
AE6
B
134 140Right-handed alpha
Helix 43
AE7
B
168 172Right-handed 310
Helix 44
AE8
B
176 180Right-handed 310
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There are 7 sheets in PDB entry 6NUS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
201 204anti-parallel
Strand 3
A
231 233parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 355first strand
Strand 2
A
338 348anti-parallel
Strand 3
A
327 335anti-parallel
Strand 4
B
114 116anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
B
127 132parallel
Strand 3
B
184 190anti-parallel
Strand 4
B
152 160anti-parallel
Strand 5
B
146 149anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
B
127 132parallel
Strand 3
B
184 190anti-parallel
Strand 4
B
152 160anti-parallel
Strand 5
B
166 167anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 400first strand
Strand 2
A
672 675anti-parallel
Strand 3
A
666 669anti-parallel
Strand 4
A
539 541parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
753 758first strand
Strand 2
A
761 767anti-parallel
Strand 3
A
612 616anti-parallel
Strand 4
A
800 802anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 821first strand
Strand 2
A
826 831anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il