Analysis of interatomic Contacts of Structural Units in PDB entry:
6NX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NX0 entry

There is 1 chain in PDB entry 6NX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 126PRO 543
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6NX0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
155 159Right-handed 310
Helix 2
AA2
A
164 176Right-handed alpha
Helix 3
AA3
A
187 191Right-handed 310
Helix 4
AA4
A
193 197Right-handed 310
Helix 5
AA5
A
203 209Right-handed alpha
Helix 6
AA6
A
231 235Right-handed 310
Helix 7
AA7
A
263 268Right-handed alpha
Helix 8
AA8
A
268 274Right-handed alpha
Helix 9
AA9
A
282 292Right-handed alpha
Helix 10
AB1
A
293 304Right-handed alpha
Helix 11
AB2
A
305 309Right-handed 310
Helix 12
AB3
A
310 327Right-handed alpha
Helix 13
AB4
A
328 332Right-handed 310
Helix 14
AB5
A
336 343Right-handed alpha
Helix 15
AB6
A
349 360Right-handed alpha
Helix 16
AB7
A
366 370Right-handed 310
Helix 17
AB8
A
379 383Right-handed 310
Helix 18
AB9
A
401 406Right-handed 310
Helix 19
AC1
A
413 421Right-handed alpha
Helix 20
AC2
A
425 430Right-handed 310
Helix 21
AC3
A
440 444Right-handed 310
Helix 22
AC4
A
455 466Right-handed alpha
Helix 23
AC5
A
469 474Right-handed alpha
Helix 24
AC6
A
484 491Right-handed 310
Helix 25
AC7
A
509 522Right-handed alpha
Helix 26
AC8
A
523 524Right-handed 310
Helix 27
AC9
A
525 532Right-handed 310
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There are 3 sheets in PDB entry 6NX0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
127 128first strand
Strand 2
A
137 143anti-parallel
Strand 3
A
147 150anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
239 241first strand
Strand 2
A
250 252anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
390 391first strand
Strand 2
A
433 434anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il