Analysis of interatomic Contacts of Structural Units in PDB entry:
6NXW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NXW entry

There are 4 chains in PDB entry 6NXW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LYS 251
B
 ALA 2LYS 251
C
 HIS 0LYS 251
D
 ALA 2LYS 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 6NXW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 29Right-handed alpha
Helix 2
AA2
A
45 47Right-handed 310
Helix 3
AA3
A
48 56Right-handed alpha
Helix 4
AA4
A
80 87Right-handed alpha
Helix 5
AA5
A
96 102Right-handed alpha
Helix 6
AA6
A
106 120Right-handed alpha
Helix 7
AA7
A
131 137Right-handed alpha
Helix 8
AA8
A
139 153Right-handed alpha
Helix 9
AA9
A
157 159Right-handed 310
Helix 10
AB1
A
167 171Right-handed 310
Helix 11
AB2
A
178 197Right-handed alpha
Helix 12
AB3
A
198 205Right-handed alpha
Helix 13
AB4
A
217 223Right-handed alpha
Helix 14
AB5
A
233 238Right-handed 310
Helix 15
AB6
A
239 247Right-handed alpha
Helix 16
AB7
A
248 251Right-handed 310
Helix 17
AB8
B
16 29Right-handed alpha
Helix 18
AB9
B
45 47Right-handed 310
Helix 19
AC1
B
48 56Right-handed alpha
Helix 20
AC2
B
80 87Right-handed alpha
Helix 21
AC3
B
96 102Right-handed alpha
Helix 22
AC4
B
106 120Right-handed alpha
Helix 23
AC5
B
131 137Right-handed alpha
Helix 24
AC6
B
139 153Right-handed alpha
Helix 25
AC7
B
178 197Right-handed alpha
Helix 26
AC8
B
198 205Right-handed alpha
Helix 27
AC9
B
217 223Right-handed alpha
Helix 28
AD1
B
233 238Right-handed 310
Helix 29
AD2
B
239 247Right-handed alpha
Helix 30
AD3
B
248 251Right-handed 310
Helix 31
AD4
C
16 29Right-handed alpha
Helix 32
AD5
C
45 47Right-handed 310
Helix 33
AD6
C
48 56Right-handed alpha
Helix 34
AD7
C
80 87Right-handed alpha
Helix 35
AD8
C
96 102Right-handed alpha
Helix 36
AD9
C
106 120Right-handed alpha
Helix 37
AE1
C
131 137Right-handed alpha
Helix 38
AE2
C
139 153Right-handed alpha
Helix 39
AE3
C
167 171Right-handed 310
Helix 40
AE4
C
178 197Right-handed alpha
Helix 41
AE5
C
198 205Right-handed alpha
Helix 42
AE6
C
217 223Right-handed alpha
Helix 43
AE7
C
233 238Right-handed 310
Helix 44
AE8
C
239 247Right-handed alpha
Helix 45
AE9
C
248 251Right-handed 310
Helix 46
AF1
D
16 29Right-handed alpha
Helix 47
AF2
D
45 47Right-handed 310
Helix 48
AF3
D
48 56Right-handed alpha
Helix 49
AF4
D
80 87Right-handed alpha
Helix 50
AF5
D
96 102Right-handed alpha
Helix 51
AF6
D
106 120Right-handed alpha
Helix 52
AF7
D
131 137Right-handed alpha
Helix 53
AF8
D
139 153Right-handed alpha
Helix 54
AF9
D
157 159Right-handed 310
Helix 55
AG1
D
167 171Right-handed 310
Helix 56
AG2
D
178 197Right-handed alpha
Helix 57
AG3
D
198 205Right-handed alpha
Helix 58
AG4
D
217 223Right-handed alpha
Helix 59
AG5
D
233 238Right-handed 310
Helix 60
AG6
D
239 247Right-handed alpha
Helix 61
AG7
D
248 251Right-handed 310
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There are 4 sheets in PDB entry 6NXW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 10first strand
Strand 2
A
38 43parallel
Strand 3
A
61 64parallel
Strand 4
A
91 94parallel
Strand 5
A
123 128parallel
Strand 6
A
161 165parallel
Strand 7
A
207 209parallel
Strand 8
A
229 232parallel
Strand 9
A
5 10parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 10first strand
Strand 2
B
38 43parallel
Strand 3
B
61 64parallel
Strand 4
B
91 94parallel
Strand 5
B
123 128parallel
Strand 6
B
161 165parallel
Strand 7
B
207 209parallel
Strand 8
B
229 232parallel
Strand 9
B
5 10parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 10first strand
Strand 2
C
38 43parallel
Strand 3
C
61 64parallel
Strand 4
C
91 94parallel
Strand 5
C
123 128parallel
Strand 6
C
161 165parallel
Strand 7
C
207 209parallel
Strand 8
C
229 232parallel
Strand 9
C
5 10parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 10first strand
Strand 2
D
38 43parallel
Strand 3
D
61 64parallel
Strand 4
D
91 94parallel
Strand 5
D
123 128parallel
Strand 6
D
161 165parallel
Strand 7
D
207 209parallel
Strand 8
D
229 232parallel
Strand 9
D
5 10parallel
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