Analysis of interatomic Contacts of Structural Units in PDB entry:
6NYG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NYG entry

There are 12 chains in PDB entry 6NYG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 27THR 811
B
 LEU 27THR 811
C
 LEU 27THR 811
D
 LEU 27THR 811
E
 LEU 27THR 811
F
 LEU 27THR 811
G
 LEU 27THR 811
H
 LEU 27THR 811
I
 LEU 27THR 811
J
 LEU 27THR 811
K
 LEU 27THR 811
L
 LEU 27THR 811
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 6NYG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 34Right-handed alpha
Helix 2
AA2
A
35 38Right-handed 310
Helix 3
AA3
A
56 60Right-handed 310
Helix 4
AA4
A
721 725Right-handed alpha
Helix 5
AA5
A
744 754Right-handed alpha
Helix 6
AA6
A
755 759Right-handed 310
Helix 7
AA7
A
761 765Right-handed 310
Helix 8
AA8
B
29 34Right-handed alpha
Helix 9
AA9
B
35 38Right-handed 310
Helix 10
AB1
B
56 60Right-handed 310
Helix 11
AB2
B
721 725Right-handed alpha
Helix 12
AB3
B
744 754Right-handed alpha
Helix 13
AB4
B
755 759Right-handed 310
Helix 14
AB5
B
761 765Right-handed 310
Helix 15
AB6
C
29 34Right-handed alpha
Helix 16
AB7
C
35 38Right-handed 310
Helix 17
AB8
C
56 60Right-handed 310
Helix 18
AB9
C
721 725Right-handed alpha
Helix 19
AC1
C
744 754Right-handed alpha
Helix 20
AC2
C
755 759Right-handed 310
Helix 21
AC3
C
761 765Right-handed 310
Helix 22
AC4
D
29 34Right-handed alpha
Helix 23
AC5
D
35 38Right-handed 310
Helix 24
AC6
D
56 60Right-handed 310
Helix 25
AC7
D
721 725Right-handed alpha
Helix 26
AC8
D
744 754Right-handed alpha
Helix 27
AC9
D
755 759Right-handed 310
Helix 28
AD1
D
761 765Right-handed 310
Helix 29
AD2
E
29 34Right-handed alpha
Helix 30
AD3
E
35 38Right-handed 310
Helix 31
AD4
E
56 60Right-handed 310
Helix 32
AD5
E
721 725Right-handed alpha
Helix 33
AD6
E
744 754Right-handed alpha
Helix 34
AD7
E
755 759Right-handed 310
Helix 35
AD8
E
761 765Right-handed 310
Helix 36
AD9
F
29 34Right-handed alpha
Helix 37
AE1
F
35 38Right-handed 310
Helix 38
AE2
F
56 60Right-handed 310
Helix 39
AE3
F
721 725Right-handed alpha
Helix 40
AE4
F
744 754Right-handed alpha
Helix 41
AE5
F
755 759Right-handed 310
Helix 42
AE6
F
761 765Right-handed 310
Helix 43
AE7
G
29 34Right-handed alpha
Helix 44
AE8
G
35 38Right-handed 310
Helix 45
AE9
G
56 60Right-handed 310
Helix 46
AF1
G
721 725Right-handed alpha
Helix 47
AF2
G
744 754Right-handed alpha
Helix 48
AF3
G
755 759Right-handed 310
Helix 49
AF4
G
761 765Right-handed 310
Helix 50
AF5
H
29 34Right-handed alpha
Helix 51
AF6
H
35 38Right-handed 310
Helix 52
AF7
H
56 60Right-handed 310
Helix 53
AF8
H
721 725Right-handed alpha
Helix 54
AF9
H
744 754Right-handed alpha
Helix 55
AG1
H
755 759Right-handed 310
Helix 56
AG2
H
761 765Right-handed 310
Helix 57
AG3
I
29 34Right-handed alpha
Helix 58
AG4
I
35 38Right-handed 310
Helix 59
AG5
I
56 60Right-handed 310
Helix 60
AG6
I
721 725Right-handed alpha
Helix 61
AG7
I
744 754Right-handed alpha
Helix 62
AG8
I
755 759Right-handed 310
Helix 63
AG9
I
761 765Right-handed 310
Helix 64
AH1
J
29 34Right-handed alpha
Helix 65
AH2
J
35 38Right-handed 310
Helix 66
AH3
J
56 60Right-handed 310
Helix 67
AH4
J
721 725Right-handed alpha
Helix 68
AH5
J
744 754Right-handed alpha
Helix 69
AH6
J
755 759Right-handed 310
Helix 70
AH7
J
761 765Right-handed 310
Helix 71
AH8
K
29 34Right-handed alpha
Helix 72
AH9
K
35 38Right-handed 310
Helix 73
AI1
K
56 60Right-handed 310
Helix 74
AI2
K
721 725Right-handed alpha
Helix 75
AI3
K
744 754Right-handed alpha
Helix 76
AI4
K
755 759Right-handed 310
Helix 77
AI5
K
761 765Right-handed 310
Helix 78
AI6
L
29 34Right-handed alpha
Helix 79
AI7
L
35 38Right-handed 310
Helix 80
AI8
L
56 60Right-handed 310
Helix 81
AI9
L
721 725Right-handed alpha
Helix 82
AJ1
L
744 754Right-handed alpha
Helix 83
AJ2
L
755 759Right-handed 310
Helix 84
AJ3
L
761 765Right-handed 310
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