Analysis of interatomic Contacts of Structural Units in PDB entry:
6NYN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NYN entry

There are 12 chains in PDB entry 6NYN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 27THR 811
B
 LEU 27THR 811
C
 LEU 27THR 811
D
 LEU 27THR 811
E
 LEU 27THR 811
F
 LEU 27THR 811
G
 LEU 27THR 811
H
 LEU 27THR 811
I
 LEU 27THR 811
J
 LEU 27THR 811
K
 LEU 27THR 811
L
 LEU 27THR 811
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 6NYN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 38Right-handed alpha
Helix 2
AA2
A
71 75Right-handed 310
Helix 3
AA3
A
721 725Right-handed alpha
Helix 4
AA4
A
744 754Right-handed alpha
Helix 5
AA5
A
761 765Right-handed 310
Helix 6
AA6
B
29 38Right-handed alpha
Helix 7
AA7
B
71 75Right-handed 310
Helix 8
AA8
B
721 725Right-handed alpha
Helix 9
AA9
B
744 754Right-handed alpha
Helix 10
AB1
B
761 765Right-handed 310
Helix 11
AB2
C
29 38Right-handed alpha
Helix 12
AB3
C
71 75Right-handed 310
Helix 13
AB4
C
721 725Right-handed alpha
Helix 14
AB5
C
744 754Right-handed alpha
Helix 15
AB6
C
761 765Right-handed 310
Helix 16
AB7
D
29 38Right-handed alpha
Helix 17
AB8
D
71 75Right-handed 310
Helix 18
AB9
D
721 725Right-handed alpha
Helix 19
AC1
D
744 754Right-handed alpha
Helix 20
AC2
D
761 765Right-handed 310
Helix 21
AC3
E
29 38Right-handed alpha
Helix 22
AC4
E
71 75Right-handed 310
Helix 23
AC5
E
721 725Right-handed alpha
Helix 24
AC6
E
744 754Right-handed alpha
Helix 25
AC7
E
761 765Right-handed 310
Helix 26
AC8
F
29 38Right-handed alpha
Helix 27
AC9
F
71 75Right-handed 310
Helix 28
AD1
F
721 725Right-handed alpha
Helix 29
AD2
F
744 754Right-handed alpha
Helix 30
AD3
F
761 765Right-handed 310
Helix 31
AD4
G
29 38Right-handed alpha
Helix 32
AD5
G
71 75Right-handed 310
Helix 33
AD6
G
721 725Right-handed alpha
Helix 34
AD7
G
744 754Right-handed alpha
Helix 35
AD8
G
761 765Right-handed 310
Helix 36
AD9
H
29 38Right-handed alpha
Helix 37
AE1
H
71 75Right-handed 310
Helix 38
AE2
H
721 725Right-handed alpha
Helix 39
AE3
H
744 754Right-handed alpha
Helix 40
AE4
H
761 765Right-handed 310
Helix 41
AE5
I
29 38Right-handed alpha
Helix 42
AE6
I
71 75Right-handed 310
Helix 43
AE7
I
721 725Right-handed alpha
Helix 44
AE8
I
744 754Right-handed alpha
Helix 45
AE9
I
761 765Right-handed 310
Helix 46
AF1
J
29 38Right-handed alpha
Helix 47
AF2
J
71 75Right-handed 310
Helix 48
AF3
J
721 725Right-handed alpha
Helix 49
AF4
J
744 754Right-handed alpha
Helix 50
AF5
J
761 765Right-handed 310
Helix 51
AF6
K
29 38Right-handed alpha
Helix 52
AF7
K
71 75Right-handed 310
Helix 53
AF8
K
721 725Right-handed alpha
Helix 54
AF9
K
744 754Right-handed alpha
Helix 55
AG1
K
761 765Right-handed 310
Helix 56
AG2
L
29 38Right-handed alpha
Helix 57
AG3
L
71 75Right-handed 310
Helix 58
AG4
L
721 725Right-handed alpha
Helix 59
AG5
L
744 754Right-handed alpha
Helix 60
AG6
L
761 765Right-handed 310
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