Analysis of interatomic Contacts of Structural Units in PDB entry:
6NZ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NZ4 entry

There are 2 chains in PDB entry 6NZ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 19GLU 485
B
 ASP 24GLU 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6NZ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 23Right-handed 310
Helix 2
AA2
A
38 52Right-handed alpha
Helix 3
AA3
A
70 75Right-handed alpha
Helix 4
AA4
A
95 104Right-handed alpha
Helix 5
AA5
A
150 161Right-handed 310
Helix 6
AA6
A
163 173Right-handed alpha
Helix 7
AA7
A
174 179Right-handed alpha
Helix 8
AA8
A
180 182Right-handed 310
Helix 9
AA9
A
183 194Right-handed alpha
Helix 10
AB1
A
201 222Right-handed alpha
Helix 11
AB2
A
230 234Right-handed 310
Helix 12
AB3
A
236 240Right-handed 310
Helix 13
AB4
A
242 246Right-handed 310
Helix 14
AB5
A
257 263Right-handed alpha
Helix 15
AB6
A
268 284Right-handed alpha
Helix 16
AB7
A
284 292Right-handed alpha
Helix 17
AB8
A
293 296Right-handed 310
Helix 18
AB9
A
304 312Right-handed alpha
Helix 19
AC1
A
312 328Right-handed alpha
Helix 20
AC2
A
329 331Right-handed 310
Helix 21
AC3
A
336 341Right-handed 310
Helix 22
AC4
A
355 359Right-handed 310
Helix 23
AC5
A
360 377Right-handed alpha
Helix 24
AC6
A
380 384Right-handed 310
Helix 25
AC7
A
438 442Right-handed 310
Helix 26
AC8
A
461 465Right-handed 310
Helix 27
AC9
A
471 481Right-handed alpha
Helix 28
AD1
A
482 484Right-handed 310
Helix 29
AD2
B
38 52Right-handed alpha
Helix 30
AD3
B
70 75Right-handed alpha
Helix 31
AD4
B
95 103Right-handed alpha
Helix 32
AD5
B
150 161Right-handed 310
Helix 33
AD6
B
163 172Right-handed alpha
Helix 34
AD7
B
174 179Right-handed alpha
Helix 35
AD8
B
180 182Right-handed 310
Helix 36
AD9
B
183 194Right-handed alpha
Helix 37
AE1
B
201 222Right-handed alpha
Helix 38
AE2
B
230 235Right-handed alpha
Helix 39
AE3
B
242 246Right-handed 310
Helix 40
AE4
B
257 263Right-handed alpha
Helix 41
AE5
B
268 284Right-handed alpha
Helix 42
AE6
B
284 292Right-handed alpha
Helix 43
AE7
B
293 296Right-handed 310
Helix 44
AE8
B
304 312Right-handed alpha
Helix 45
AE9
B
312 328Right-handed alpha
Helix 46
AF1
B
329 331Right-handed 310
Helix 47
AF2
B
336 341Right-handed 310
Helix 48
AF3
B
355 359Right-handed 310
Helix 49
AF4
B
360 377Right-handed alpha
Helix 50
AF5
B
378 384Right-handed 310
Helix 51
AF6
B
439 444Right-handed alpha
Helix 52
AF7
B
461 465Right-handed 310
Helix 53
AF8
B
471 481Right-handed alpha
Helix 54
AF9
B
482 484Right-handed 310
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There are 4 sheets in PDB entry 6NZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 84first strand
Strand 2
A
118 126anti-parallel
Strand 3
A
140 148anti-parallel
Strand 4
A
25 33parallel
Strand 5
A
298 303parallel
Strand 6
A
348 353parallel
Strand 7
A
388 393parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 407first strand
Strand 2
A
410 418anti-parallel
Strand 3
A
424 427anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 84first strand
Strand 2
B
118 126anti-parallel
Strand 3
B
140 148anti-parallel
Strand 4
B
25 33parallel
Strand 5
B
298 303parallel
Strand 6
B
348 353parallel
Strand 7
B
388 393parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
400 407first strand
Strand 2
B
410 418anti-parallel
Strand 3
B
424 427anti-parallel
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