Analysis of interatomic Contacts of Structural Units in PDB entry:
6NZI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NZI entry

There is 1 chain in PDB entry 6NZI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 1033
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6NZI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 8Right-handed alpha
Helix 2
AA2
A
8 30Right-handed alpha
Helix 3
AA3
A
53 61Right-handed alpha
Helix 4
AA4
A
61 67Right-handed alpha
Helix 5
AA5
A
99 115Right-handed alpha
Helix 6
AA6
A
116 118Right-handed 310
Helix 7
AA7
A
119 126Right-handed alpha
Helix 8
AA8
A
151 161Right-handed alpha
Helix 9
AA9
A
189 196Right-handed alpha
Helix 10
AB1
A
199 211Right-handed alpha
Helix 11
AB2
A
242 248Right-handed alpha
Helix 12
AB3
A
300 308Right-handed alpha
Helix 13
AB4
A
329 360Right-handed alpha
Helix 14
AB5
A
361 386Right-handed alpha
Helix 15
AB6
A
393 401Right-handed alpha
Helix 16
AB7
A
401 421Right-handed alpha
Helix 17
AB8
A
427 454Right-handed alpha
Helix 18
AB9
A
455 459Right-handed 310
Helix 19
AC1
A
463 496Right-handed alpha
Helix 20
AC2
A
513 536Right-handed alpha
Helix 21
AC3
A
541 558Right-handed alpha
Helix 22
AC4
A
583 601Right-handed alpha
Helix 23
AC5
A
633 637Right-handed 310
Helix 24
AC6
A
639 642Right-handed 310
Helix 25
AC7
A
643 656Right-handed alpha
Helix 26
AC8
A
691 708Right-handed alpha
Helix 27
AC9
A
732 740Right-handed alpha
Helix 28
AD1
A
742 754Right-handed alpha
Helix 29
AD2
A
777 780Right-handed 310
Helix 30
AD3
A
783 788Right-handed 310
Helix 31
AD4
A
800 803Right-handed 310
Helix 32
AD5
A
836 850Right-handed alpha
Helix 33
AD6
A
861 864Right-handed 310
Helix 34
AD7
A
873 893Right-handed alpha
Helix 35
AD8
A
896 903Right-handed alpha
Helix 36
AD9
A
904 919Right-handed alpha
Helix 37
AE1
A
924 955Right-handed alpha
Helix 38
AE2
A
962 986Right-handed alpha
Helix 39
AE3
A
986 992Right-handed alpha
Helix 40
AE4
A
996 1009Right-handed alpha
Helix 41
AE5
A
1009 1017Right-handed alpha
Helix 42
AE6
A
1021 1032Right-handed alpha
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There are 10 sheets in PDB entry 6NZI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
42 46anti-parallel
Strand 3
A
128 132anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
287 291anti-parallel
Strand 3
A
138 144anti-parallel
Strand 4
A
321 327anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 272first strand
Strand 2
A
182 188anti-parallel
Strand 3
A
768 775parallel
Strand 4
A
757 763anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
232 233anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 608first strand
Strand 2
A
624 631anti-parallel
Strand 3
A
611 613anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 608first strand
Strand 2
A
624 631anti-parallel
Strand 3
A
571 577anti-parallel
Strand 4
A
662 666anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 718first strand
Strand 2
A
822 831anti-parallel
Strand 3
A
817 819anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 718first strand
Strand 2
A
822 831anti-parallel
Strand 3
A
681 686anti-parallel
Strand 4
A
855 859anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 731first strand
Strand 2
A
805 812anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
791 793first strand
Strand 2
A
797 799anti-parallel
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