Analysis of interatomic Contacts of Structural Units in PDB entry:
6NZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NZJ entry

There are 2 chains in PDB entry 6NZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 273
B
 MET 1LEU 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6NZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 27Right-handed alpha
Helix 2
AA2
A
44 49Right-handed alpha
Helix 3
AA3
A
55 62Right-handed alpha
Helix 4
AA4
A
69 74Right-handed alpha
Helix 5
AA5
A
78 80Right-handed 310
Helix 6
AA6
A
95 110Right-handed alpha
Helix 7
AA7
A
134 139Right-handed alpha
Helix 8
AA8
A
152 169Right-handed alpha
Helix 9
AA9
A
188 200Right-handed alpha
Helix 10
AB1
A
211 220Right-handed alpha
Helix 11
AB2
A
223 228Right-handed alpha
Helix 12
AB3
A
231 246Right-handed alpha
Helix 13
AB4
A
257 268Right-handed alpha
Helix 14
AB5
B
13 28Right-handed alpha
Helix 15
AB6
B
44 49Right-handed alpha
Helix 16
AB7
B
55 62Right-handed alpha
Helix 17
AB8
B
69 74Right-handed alpha
Helix 18
AB9
B
78 80Right-handed 310
Helix 19
AC1
B
95 110Right-handed alpha
Helix 20
AC2
B
134 139Right-handed alpha
Helix 21
AC3
B
152 169Right-handed alpha
Helix 22
AC4
B
170 173Right-handed 310
Helix 23
AC5
B
188 200Right-handed alpha
Helix 24
AC6
B
211 220Right-handed alpha
Helix 25
AC7
B
223 228Right-handed alpha
Helix 26
AC8
B
231 247Right-handed alpha
Helix 27
AC9
B
257 268Right-handed alpha
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There are 2 sheets in PDB entry 6NZJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
82 85anti-parallel
Strand 3
A
32 37parallel
Strand 4
A
119 124parallel
Strand 5
A
2 8parallel
Strand 6
A
144 149parallel
Strand 7
A
175 182parallel
Strand 8
A
204 208parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
82 85anti-parallel
Strand 3
B
32 37parallel
Strand 4
B
119 124parallel
Strand 5
B
2 8parallel
Strand 6
B
144 149parallel
Strand 7
B
175 182parallel
Strand 8
B
204 208parallel
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