Analysis of interatomic Contacts of Structural Units in PDB entry:
6NZW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6NZW entry

There are 6 chains in PDB entry 6NZW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 15	ASN 408
B	PRO 15	ASN 408
C	PRO 15	ASN 408
D	PRO 15	ASN 408
E	PRO 15	ASN 408
F	PRO 15	ASN 408

There are 96 helices in PDB entry 6NZW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	21	Right-handed 310
Helix 2	AA2	A	22	25	Right-handed 310
Helix 3	AA3	A	26	49	Right-handed alpha
Helix 4	AA4	A	103	116	Right-handed alpha
Helix 5	AA5	A	119	124	Right-handed alpha
Helix 6	AA6	A	124	146	Right-handed alpha
Helix 7	AA7	A	146	165	Right-handed alpha
Helix 8	AA8	A	167	174	Right-handed alpha
Helix 9	AA9	A	234	254	Right-handed alpha
Helix 10	AB1	A	258	286	Right-handed alpha
Helix 11	AB2	A	287	289	Right-handed 310
Helix 12	AB3	A	314	346	Right-handed alpha
Helix 13	AB4	A	353	361	Right-handed alpha
Helix 14	AB5	A	372	383	Right-handed alpha
Helix 15	AB6	A	384	389	Right-handed alpha
Helix 16	AB7	A	395	408	Right-handed alpha
Helix 17	AB8	B	16	21	Right-handed 310
Helix 18	AB9	B	22	25	Right-handed 310
Helix 19	AC1	B	26	49	Right-handed alpha
Helix 20	AC2	B	103	116	Right-handed alpha
Helix 21	AC3	B	119	124	Right-handed alpha
Helix 22	AC4	B	124	146	Right-handed alpha
Helix 23	AC5	B	146	165	Right-handed alpha
Helix 24	AC6	B	167	174	Right-handed alpha
Helix 25	AC7	B	234	254	Right-handed alpha
Helix 26	AC8	B	258	286	Right-handed alpha
Helix 27	AC9	B	287	289	Right-handed 310
Helix 28	AD1	B	314	346	Right-handed alpha
Helix 29	AD2	B	353	361	Right-handed alpha
Helix 30	AD3	B	372	383	Right-handed alpha
Helix 31	AD4	B	384	389	Right-handed alpha
Helix 32	AD5	B	395	408	Right-handed alpha
Helix 33	AD6	C	16	21	Right-handed 310
Helix 34	AD7	C	22	25	Right-handed 310
Helix 35	AD8	C	26	49	Right-handed alpha
Helix 36	AD9	C	103	116	Right-handed alpha
Helix 37	AE1	C	119	124	Right-handed alpha
Helix 38	AE2	C	124	146	Right-handed alpha
Helix 39	AE3	C	146	165	Right-handed alpha
Helix 40	AE4	C	167	174	Right-handed alpha
Helix 41	AE5	C	234	254	Right-handed alpha
Helix 42	AE6	C	258	286	Right-handed alpha
Helix 43	AE7	C	287	289	Right-handed 310
Helix 44	AE8	C	314	346	Right-handed alpha
Helix 45	AE9	C	353	361	Right-handed alpha
Helix 46	AF1	C	372	383	Right-handed alpha
Helix 47	AF2	C	384	389	Right-handed alpha
Helix 48	AF3	C	395	408	Right-handed alpha
Helix 49	AF4	D	16	21	Right-handed 310
Helix 50	AF5	D	22	25	Right-handed 310
Helix 51	AF6	D	26	49	Right-handed alpha
Helix 52	AF7	D	103	116	Right-handed alpha
Helix 53	AF8	D	119	124	Right-handed alpha
Helix 54	AF9	D	124	146	Right-handed alpha
Helix 55	AG1	D	146	165	Right-handed alpha
Helix 56	AG2	D	167	174	Right-handed alpha
Helix 57	AG3	D	234	254	Right-handed alpha
Helix 58	AG4	D	258	286	Right-handed alpha
Helix 59	AG5	D	287	289	Right-handed 310
Helix 60	AG6	D	314	346	Right-handed alpha
Helix 61	AG7	D	353	361	Right-handed alpha
Helix 62	AG8	D	372	383	Right-handed alpha
Helix 63	AG9	D	384	389	Right-handed alpha
Helix 64	AH1	D	395	408	Right-handed alpha
Helix 65	AH2	E	16	21	Right-handed 310
Helix 66	AH3	E	22	25	Right-handed 310
Helix 67	AH4	E	26	49	Right-handed alpha
Helix 68	AH5	E	103	116	Right-handed alpha
Helix 69	AH6	E	119	124	Right-handed alpha
Helix 70	AH7	E	124	146	Right-handed alpha
Helix 71	AH8	E	146	165	Right-handed alpha
Helix 72	AH9	E	167	174	Right-handed alpha
Helix 73	AI1	E	234	254	Right-handed alpha
Helix 74	AI2	E	258	286	Right-handed alpha
Helix 75	AI3	E	287	289	Right-handed 310
Helix 76	AI4	E	314	346	Right-handed alpha
Helix 77	AI5	E	355	361	Right-handed alpha
Helix 78	AI6	E	372	383	Right-handed alpha
Helix 79	AI7	E	384	389	Right-handed alpha
Helix 80	AI8	E	395	408	Right-handed alpha
Helix 81	AI9	F	16	21	Right-handed 310
Helix 82	AJ1	F	22	25	Right-handed 310
Helix 83	AJ2	F	26	49	Right-handed alpha
Helix 84	AJ3	F	103	116	Right-handed alpha
Helix 85	AJ4	F	119	124	Right-handed alpha
Helix 86	AJ5	F	124	146	Right-handed alpha
Helix 87	AJ6	F	146	165	Right-handed alpha
Helix 88	AJ7	F	167	174	Right-handed alpha
Helix 89	AJ8	F	234	254	Right-handed alpha
Helix 90	AJ9	F	258	286	Right-handed alpha
Helix 91	AK1	F	287	289	Right-handed 310
Helix 92	AK2	F	314	346	Right-handed alpha
Helix 93	AK3	F	353	361	Right-handed alpha
Helix 94	AK4	F	372	383	Right-handed alpha
Helix 95	AK5	F	384	389	Right-handed alpha
Helix 96	AK6	F	395	408	Right-handed alpha

There are 12 sheets in PDB entry 6NZW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	307	311	anti-parallel
Strand 3	A	292	296	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	61	first strand
Strand 2	A	64	65	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	56	first strand
Strand 2	B	307	311	anti-parallel
Strand 3	B	292	296	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	61	first strand
Strand 2	B	64	65	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	56	first strand
Strand 2	C	307	311	anti-parallel
Strand 3	C	292	296	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	61	first strand
Strand 2	C	64	65	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	55	56	first strand
Strand 2	D	307	311	anti-parallel
Strand 3	D	292	296	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	61	first strand
Strand 2	D	64	65	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	55	56	first strand
Strand 2	E	307	311	anti-parallel
Strand 3	E	292	296	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	61	first strand
Strand 2	E	64	65	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	55	56	first strand
Strand 2	F	307	311	anti-parallel
Strand 3	F	292	296	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	60	61	first strand
Strand 2	F	64	65	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6NZW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6NZW