Analysis of interatomic Contacts of Structural Units in PDB entry:
6O16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O16 entry

There are 2 chains in PDB entry 6O16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 231ASP 1149
B
 VAL 231ARG 803
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 6O16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
238 248Right-handed alpha
Helix 2
AA2
A
249 252Right-handed 310
Helix 3
AA3
A
253 264Right-handed alpha
Helix 4
AA4
A
276 288Right-handed alpha
Helix 5
AA5
A
303 318Right-handed alpha
Helix 6
AA6
A
346 356Right-handed alpha
Helix 7
AA7
A
369 373Right-handed 310
Helix 8
AA8
A
374 394Right-handed alpha
Helix 9
AA9
A
409 414Right-handed alpha
Helix 10
AB1
A
447 463Right-handed alpha
Helix 11
AB2
A
474 489Right-handed alpha
Helix 12
AB3
A
591 597Right-handed alpha
Helix 13
AB4
A
614 617Right-handed 310
Helix 14
AB5
A
654 666Right-handed alpha
Helix 15
AB6
A
678 685Right-handed alpha
Helix 16
AB7
A
691 696Right-handed 310
Helix 17
AB8
A
698 708Right-handed alpha
Helix 18
AB9
A
712 716Right-handed 310
Helix 19
AC1
A
723 737Right-handed alpha
Helix 20
AC2
A
762 771Right-handed alpha
Helix 21
AC3
A
774 784Right-handed alpha
Helix 22
AC4
A
789 802Right-handed alpha
Helix 23
AC5
A
817 837Right-handed alpha
Helix 24
AC6
A
840 845Right-handed alpha
Helix 25
AC7
A
845 861Right-handed alpha
Helix 26
AC8
A
864 871Right-handed alpha
Helix 27
AC9
A
874 896Right-handed alpha
Helix 28
AD1
A
911 926Right-handed alpha
Helix 29
AD2
A
941 945Right-handed 310
Helix 30
AD3
A
995 1001Right-handed alpha
Helix 31
AD4
A
1050 1063Right-handed alpha
Helix 32
AD5
A
1067 1077Right-handed 310
Helix 33
AD6
A
1080 1085Right-handed 310
Helix 34
AD7
A
1093 1105Right-handed alpha
Helix 35
AD8
A
1109 1120Right-handed alpha
Helix 36
AD9
A
1124 1130Right-handed alpha
Helix 37
AE1
A
1131 1132Right-handed 310
Helix 38
AE2
A
1133 1135Right-handed 310
Helix 39
AE3
A
1136 1143Right-handed alpha
Helix 40
AE4
B
238 248Right-handed alpha
Helix 41
AE5
B
249 252Right-handed 310
Helix 42
AE6
B
253 264Right-handed alpha
Helix 43
AE7
B
272 275Right-handed 310
Helix 44
AE8
B
276 288Right-handed alpha
Helix 45
AE9
B
303 319Right-handed alpha
Helix 46
AF1
B
346 356Right-handed alpha
Helix 47
AF2
B
369 373Right-handed 310
Helix 48
AF3
B
374 394Right-handed alpha
Helix 49
AF4
B
409 414Right-handed alpha
Helix 50
AF5
B
448 463Right-handed alpha
Helix 51
AF6
B
474 489Right-handed alpha
Helix 52
AF7
B
591 600Right-handed alpha
Helix 53
AF8
B
654 664Right-handed alpha
Helix 54
AF9
B
678 685Right-handed alpha
Helix 55
AG1
B
691 696Right-handed 310
Helix 56
AG2
B
698 708Right-handed alpha
Helix 57
AG3
B
712 716Right-handed 310
Helix 58
AG4
B
723 737Right-handed alpha
Helix 59
AG5
B
762 771Right-handed alpha
Helix 60
AG6
B
774 784Right-handed alpha
Helix 61
AG7
B
789 802Right-handed alpha
Helix 62
AG8
B
820 838Right-handed alpha
Helix 63
AG9
B
840 845Right-handed alpha
Helix 64
AH1
B
845 861Right-handed alpha
Helix 65
AH2
B
864 871Right-handed alpha
Helix 66
AH3
B
874 896Right-handed alpha
Helix 67
AH4
B
911 926Right-handed alpha
Helix 68
AH5
B
995 1001Right-handed alpha
Helix 69
AH6
B
1050 1063Right-handed alpha
Helix 70
AH7
B
1067 1077Right-handed 310
Helix 71
AH8
B
1080 1085Right-handed 310
Helix 72
AH9
B
1093 1105Right-handed alpha
Helix 73
AI1
B
1109 1120Right-handed alpha
Helix 74
AI2
B
1124 1130Right-handed alpha
Helix 75
AI3
B
1131 1132Right-handed 310
Helix 76
AI4
B
1133 1135Right-handed 310
Helix 77
AI5
B
1136 1143Right-handed alpha
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There are 12 sheets in PDB entry 6O16. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 328first strand
Strand 2
A
341 345parallel
Strand 3
A
296 301parallel
Strand 4
A
362 367parallel
Strand 5
A
399 404parallel
Strand 6
A
266 271parallel
Strand 7
A
425 428parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 439first strand
Strand 2
A
671 675parallel
Strand 3
A
625 630parallel
Strand 4
A
467 471parallel
Strand 5
A
608 612parallel
Strand 6
A
582 586parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
633 639first strand
Strand 2
A
646 652anti-parallel
Strand 3
A
977 980parallel
Strand 4
A
984 987anti-parallel
Strand 5
A
953 959parallel
Strand 6
A
948 950anti-parallel
Strand 7
A
930 933anti-parallel
Strand 8
A
972 974anti-parallel
Strand 9
A
990 991anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1005 1010first strand
Strand 2
A
1025 1033anti-parallel
Strand 3
A
1017 1018anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1005 1010first strand
Strand 2
A
1025 1033anti-parallel
Strand 3
A
1039 1046anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 333first strand
Strand 2
B
325 329anti-parallel
Strand 3
B
341 345parallel
Strand 4
B
296 301parallel
Strand 5
B
362 367parallel
Strand 6
B
399 404parallel
Strand 7
B
266 270parallel
Strand 8
B
425 427parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
435 439first strand
Strand 2
B
671 675parallel
Strand 3
B
625 630parallel
Strand 4
B
467 471parallel
Strand 5
B
608 612parallel
Strand 6
B
582 586parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
633 639first strand
Strand 2
B
646 652anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
948 949first strand
Strand 2
B
930 933anti-parallel
Strand 3
B
972 974anti-parallel
Strand 4
B
990 991anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
958 959first strand
Strand 2
B
984 987parallel
Strand 3
B
977 980anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1005 1010first strand
Strand 2
B
1024 1033anti-parallel
Strand 3
B
1017 1019anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1005 1010first strand
Strand 2
B
1024 1033anti-parallel
Strand 3
B
1039 1046anti-parallel
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