Analysis of interatomic Contacts of Structural Units in PDB entry:
6O1O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O1O entry

There are 14 chains in PDB entry 6O1O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	UNK 7	UNK 800
B	UNK 4	UNK 290
C	UNK 2	UNK 243
D	UNK 2	UNK 243
E	UNK 2	UNK 243
F	UNK 2	UNK 243
G	UNK 2	UNK 243
H	UNK 2	UNK 243
I	UNK 7	UNK 129
J	UNK 7	UNK 129
K	UNK 7	UNK 129
L	UNK 7	UNK 129
M	U -3	G 32
N	U 8	A 37

There are 83 helices in PDB entry 6O1O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	18	Right-handed 310
Helix 2	AA2	A	21	26	Right-handed 310
Helix 3	AA3	A	40	57	Right-handed alpha
Helix 4	AA4	A	63	68	Right-handed alpha
Helix 5	AA5	A	69	73	Right-handed 310
Helix 6	AA6	A	93	104	Right-handed alpha
Helix 7	AA7	A	165	181	Right-handed alpha
Helix 8	AA8	A	183	188	Right-handed alpha
Helix 9	AA9	A	193	206	Right-handed alpha
Helix 10	AB1	A	221	237	Right-handed alpha
Helix 11	AB2	A	241	246	Right-handed alpha
Helix 12	AB3	A	263	272	Right-handed alpha
Helix 13	AB4	A	280	307	Right-handed alpha
Helix 14	AB5	A	317	321	Right-handed 310
Helix 15	AB6	A	329	349	Right-handed alpha
Helix 16	AB7	A	364	371	Right-handed 310
Helix 17	AB8	A	372	385	Right-handed alpha
Helix 18	AB9	A	489	497	Right-handed alpha
Helix 19	AC1	A	535	540	Right-handed alpha
Helix 20	AC2	A	556	563	Right-handed alpha
Helix 21	AC3	A	574	597	Right-handed alpha
Helix 22	AC4	A	641	658	Right-handed alpha
Helix 23	AC5	A	679	695	Right-handed alpha
Helix 24	AC6	A	708	721	Right-handed alpha
Helix 25	AC7	A	722	727	Right-handed alpha
Helix 26	AC8	A	734	746	Right-handed alpha
Helix 27	AC9	A	764	768	Right-handed 310
Helix 28	AD1	A	790	798	Right-handed alpha
Helix 29	AD2	B	19	34	Right-handed alpha
Helix 30	AD3	B	36	50	Right-handed alpha
Helix 31	AD4	B	69	73	Right-handed 310
Helix 32	AD5	B	90	99	Right-handed alpha
Helix 33	AD6	B	100	105	Right-handed alpha
Helix 34	AD7	B	169	178	Right-handed alpha
Helix 35	AD8	C	52	54	Right-handed 310
Helix 36	AD9	C	55	65	Right-handed alpha
Helix 37	AE1	C	87	92	Right-handed alpha
Helix 38	AE2	C	102	107	Right-handed alpha
Helix 39	AE3	C	192	205	Right-handed alpha
Helix 40	AE4	D	53	65	Right-handed alpha
Helix 41	AE5	D	102	107	Right-handed 310
Helix 42	AE6	D	188	197	Right-handed alpha
Helix 43	AE7	D	199	208	Right-handed alpha
Helix 44	AE8	E	54	59	Right-handed alpha
Helix 45	AE9	E	87	92	Right-handed alpha
Helix 46	AF1	E	188	196	Right-handed alpha
Helix 47	AF2	E	196	207	Right-handed alpha
Helix 48	AF3	F	56	60	Right-handed 310
Helix 49	AF4	F	102	108	Right-handed alpha
Helix 50	AF5	F	189	198	Right-handed alpha
Helix 51	AF6	F	203	207	Right-handed 310
Helix 52	AF7	G	53	66	Right-handed alpha
Helix 53	AF8	G	87	91	Right-handed 310
Helix 54	AF9	G	101	105	Right-handed 310
Helix 55	AG1	G	188	205	Right-handed alpha
Helix 56	AG2	H	53	66	Right-handed alpha
Helix 57	AG3	H	87	92	Right-handed alpha
Helix 58	AG4	H	128	132	Right-handed 310
Helix 59	AG5	H	187	206	Right-handed alpha
Helix 60	AG6	I	21	33	Right-handed alpha
Helix 61	AG7	I	38	52	Right-handed alpha
Helix 62	AG8	I	57	62	Right-handed 310
Helix 63	AG9	I	63	84	Right-handed alpha
Helix 64	AH1	I	97	107	Right-handed alpha
Helix 65	AH2	I	114	129	Right-handed alpha
Helix 66	AH3	J	21	33	Right-handed alpha
Helix 67	AH4	J	38	52	Right-handed alpha
Helix 68	AH5	J	57	62	Right-handed 310
Helix 69	AH6	J	63	84	Right-handed alpha
Helix 70	AH7	J	97	107	Right-handed alpha
Helix 71	AH8	J	114	129	Right-handed alpha
Helix 72	AH9	K	21	33	Right-handed alpha
Helix 73	AI1	K	38	52	Right-handed alpha
Helix 74	AI2	K	57	62	Right-handed 310
Helix 75	AI3	K	63	84	Right-handed alpha
Helix 76	AI4	K	97	107	Right-handed alpha
Helix 77	AI5	K	114	129	Right-handed alpha
Helix 78	AI6	L	21	33	Right-handed alpha
Helix 79	AI7	L	38	52	Right-handed alpha
Helix 80	AI8	L	57	62	Right-handed 310
Helix 81	AI9	L	63	84	Right-handed alpha
Helix 82	AJ1	L	97	107	Right-handed alpha
Helix 83	AJ2	L	114	129	Right-handed alpha

There are 14 sheets in PDB entry 6O1O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	258	first strand
Strand 2	A	359	360	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	457	459	first strand
Strand 2	A	439	441	anti-parallel
Strand 3	A	481	482	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	625	626	first strand
Strand 2	A	634	637	anti-parallel
Strand 3	A	547	553	anti-parallel
Strand 4	A	666	672	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	10	first strand
Strand 2	B	191	193	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	212	first strand
Strand 2	B	286	289	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	181	first strand
Strand 2	C	5	14	anti-parallel
Strand 3	C	184	185	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	181	first strand
Strand 2	C	5	14	anti-parallel
Strand 3	C	238	242	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	116	117	first strand
Strand 2	D	179	184	anti-parallel
Strand 3	D	6	11	anti-parallel
Strand 4	D	238	242	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	115	117	first strand
Strand 2	E	177	185	anti-parallel
Strand 3	E	5	13	anti-parallel
Strand 4	E	238	242	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	116	117	first strand
Strand 2	F	176	185	anti-parallel
Strand 3	F	5	14	anti-parallel
Strand 4	F	239	242	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	22	first strand
Strand 2	F	168	170	anti-parallel
Strand 3	F	150	151	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	115	117	first strand
Strand 2	G	181	185	anti-parallel
Strand 3	G	5	8	anti-parallel
Strand 4	G	240	242	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	14	first strand
Strand 2	G	176	179	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	7	13	first strand
Strand 2	H	177	183	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O1O

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O1O