Analysis of interatomic Contacts of Structural Units in PDB entry:
6O1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O1T entry

There are 2 chains in PDB entry 6O1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 38GLN 238
B
 VAL 38SER 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6O1T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 49Right-handed alpha
Helix 2
AA2
A
50 54Right-handed 310
Helix 3
AA3
A
55 70Right-handed alpha
Helix 4
AA4
A
81 101Right-handed alpha
Helix 5
AA5
A
175 177Right-handed 310
Helix 6
AA6
A
192 213Right-handed alpha
Helix 7
AA7
A
213 224Right-handed alpha
Helix 8
AA8
A
226 235Right-handed alpha
Helix 9
AA9
B
39 49Right-handed alpha
Helix 10
AB1
B
50 54Right-handed 310
Helix 11
AB2
B
55 70Right-handed alpha
Helix 12
AB3
B
81 101Right-handed alpha
Helix 13
AB4
B
175 177Right-handed 310
Helix 14
AB5
B
192 213Right-handed alpha
Helix 15
AB6
B
213 224Right-handed alpha
Helix 16
AB7
B
226 235Right-handed alpha
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There are 4 sheets in PDB entry 6O1T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 109first strand
Strand 2
A
122 137anti-parallel
Strand 3
A
141 158anti-parallel
Strand 4
A
167 169anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 119first strand
Strand 2
A
122 137anti-parallel
Strand 3
A
141 158anti-parallel
Strand 4
A
179 185anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 109first strand
Strand 2
B
122 137anti-parallel
Strand 3
B
141 157anti-parallel
Strand 4
B
168 169anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 119first strand
Strand 2
B
122 137anti-parallel
Strand 3
B
141 157anti-parallel
Strand 4
B
179 185anti-parallel
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