Analysis of interatomic Contacts of Structural Units in PDB entry:
6O1Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O1Y entry

There are 2 chains in PDB entry 6O1Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 106ARG 458
B
 GLU 105LYS 459
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6O1Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
106 120Right-handed alpha
Helix 2
AA2
A
152 159Right-handed alpha
Helix 3
AA3
A
159 168Right-handed alpha
Helix 4
AA4
A
201 205Right-handed 310
Helix 5
AA5
A
241 256Right-handed alpha
Helix 6
AA6
A
272 279Right-handed alpha
Helix 7
AA7
A
284 310Right-handed alpha
Helix 8
AA8
A
313 319Right-handed alpha
Helix 9
AA9
A
321 325Right-handed 310
Helix 10
AB1
A
336 341Right-handed alpha
Helix 11
AB2
A
346 367Right-handed alpha
Helix 12
AB3
A
387 394Right-handed alpha
Helix 13
AB4
A
404 413Right-handed alpha
Helix 14
AB5
A
416 420Right-handed 310
Helix 15
AB6
A
444 449Right-handed alpha
Helix 16
AB7
A
450 456Right-handed alpha
Helix 17
AB8
B
107 120Right-handed alpha
Helix 18
AB9
B
152 159Right-handed alpha
Helix 19
AC1
B
159 168Right-handed alpha
Helix 20
AC2
B
201 205Right-handed 310
Helix 21
AC3
B
241 256Right-handed alpha
Helix 22
AC4
B
284 309Right-handed alpha
Helix 23
AC5
B
313 321Right-handed alpha
Helix 24
AC6
B
336 341Right-handed alpha
Helix 25
AC7
B
347 367Right-handed alpha
Helix 26
AC8
B
368 370Right-handed 310
Helix 27
AC9
B
387 392Right-handed alpha
Helix 28
AD1
B
404 413Right-handed alpha
Helix 29
AD2
B
415 419Right-handed 310
Helix 30
AD3
B
444 449Right-handed alpha
Helix 31
AD4
B
450 457Right-handed alpha
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There are 4 sheets in PDB entry 6O1Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 135first strand
Strand 2
A
143 148anti-parallel
Strand 3
A
182 189anti-parallel
Strand 4
A
169 176anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 225first strand
Strand 2
A
211 216anti-parallel
Strand 3
A
434 440anti-parallel
Strand 4
A
426 431anti-parallel
Strand 5
A
396 399anti-parallel
Strand 6
A
232 235parallel
Strand 7
A
372 378parallel
Strand 8
A
329 333parallel
Strand 9
A
259 263parallel
Strand 10
A
280 282parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 135first strand
Strand 2
B
143 148anti-parallel
Strand 3
B
182 189anti-parallel
Strand 4
B
169 176anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 225first strand
Strand 2
B
211 216anti-parallel
Strand 3
B
434 440anti-parallel
Strand 4
B
426 431anti-parallel
Strand 5
B
396 399anti-parallel
Strand 6
B
232 235parallel
Strand 7
B
372 378parallel
Strand 8
B
329 333parallel
Strand 9
B
259 263parallel
Strand 10
B
279 282parallel
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