Analysis of interatomic Contacts of Structural Units in PDB entry:
6O22


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O22 entry

There are 6 chains in PDB entry 6O22 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 2GLY 231
B
 ASN 9ASP 225
C
 GLY -5THR 418
D
 SER 1PRO 164
E
 LEU 60ARG 134
F
 LYS 20GLY 101
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6O22. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 52Right-handed alpha
Helix 2
AA2
A
56 65Right-handed alpha
Helix 3
AA3
A
65 72Right-handed alpha
Helix 4
AA4
A
73 75Right-handed 310
Helix 5
AA5
A
76 81Right-handed alpha
Helix 6
AA6
A
92 94Right-handed 310
Helix 7
AA7
A
149 153Right-handed 310
Helix 8
AA8
A
165 177Right-handed alpha
Helix 9
AA9
A
180 185Right-handed alpha
Helix 10
AB1
A
196 207Right-handed alpha
Helix 11
AB2
A
211 220Right-handed alpha
Helix 12
AB3
B
10 40Right-handed alpha
Helix 13
AB4
B
40 52Right-handed alpha
Helix 14
AB5
B
57 62Right-handed alpha
Helix 15
AB6
B
67 71Right-handed 310
Helix 16
AB7
B
76 81Right-handed alpha
Helix 17
AB8
B
149 153Right-handed 310
Helix 18
AB9
B
156 160Right-handed 310
Helix 19
AC1
B
167 177Right-handed alpha
Helix 20
AC2
B
178 184Right-handed alpha
Helix 21
AC3
B
196 206Right-handed alpha
Helix 22
AC4
B
211 221Right-handed alpha
Helix 23
AC5
C
2 8Right-handed alpha
Helix 24
AC6
C
99 114Right-handed alpha
Helix 25
AC7
C
115 120Right-handed 310
Helix 26
AC8
C
143 159Right-handed alpha
Helix 27
AC9
C
164 167Right-handed 310
Helix 28
AD1
C
168 176Right-handed alpha
Helix 29
AD2
C
194 198Right-handed 310
Helix 30
AD3
C
203 207Right-handed 310
Helix 31
AD4
C
214 231Right-handed alpha
Helix 32
AD5
C
248 256Right-handed alpha
Helix 33
AD6
C
257 259Right-handed 310
Helix 34
AD7
C
277 281Right-handed 310
Helix 35
AD8
C
288 300Right-handed alpha
Helix 36
AD9
C
307 318Right-handed alpha
Helix 37
AE1
C
319 322Right-handed 310
Helix 38
AE2
C
354 367Right-handed alpha
Helix 39
AE3
C
372 392Right-handed alpha
Helix 40
AE4
D
50 54Right-handed 310
Helix 41
AE5
D
85 90Right-handed alpha
Helix 42
AE6
D
119 125Right-handed alpha
Helix 43
AE7
E
63 77Right-handed alpha
Helix 44
AE8
E
85 114Right-handed alpha
Helix 45
AE9
E
120 131Right-handed alpha
Helix 46
AF1
F
21 26Right-handed 310
Helix 47
AF2
F
30 41Right-handed alpha
Helix 48
AF3
F
49 76Right-handed alpha
Helix 49
AF4
F
82 90Right-handed alpha
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There are 9 sheets in PDB entry 6O22. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 90first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
119 127anti-parallel
Strand 4
A
139 141anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 89first strand
Strand 2
B
103 109anti-parallel
Strand 3
B
119 128anti-parallel
Strand 4
B
138 141anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 29first strand
Strand 2
C
45 56anti-parallel
Strand 3
C
61 73anti-parallel
Strand 4
C
79 90anti-parallel
Strand 5
C
186 193parallel
Strand 6
C
328 334anti-parallel
Strand 7
C
239 243anti-parallel
Strand 8
C
264 266parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 29first strand
Strand 2
C
45 56anti-parallel
Strand 3
C
16 23anti-parallel
Strand 4
C
396 399anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 11first strand
Strand 2
D
22 30anti-parallel
Strand 3
D
68 76anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 17first strand
Strand 2
D
135 139anti-parallel
Strand 3
D
104 117anti-parallel
Strand 4
D
93 101anti-parallel
Strand 5
D
38 44anti-parallel
Strand 6
D
55 62anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 17first strand
Strand 2
D
135 139anti-parallel
Strand 3
D
104 117anti-parallel
Strand 4
D
145 148anti-parallel
Strand 5
F
95 97anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
83 84first strand
Strand 2
F
80 81parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
118 119first strand
Strand 2
F
45 46parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il