Analysis of interatomic Contacts of Structural Units in PDB entry:
6O2K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O2K entry

There are 2 chains in PDB entry 6O2K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 1273SER 1411
B
 THR 1270SER 1411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6O2K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1274 1288Right-handed alpha
Helix 2
AA2
A
1308 1312Right-handed 310
Helix 3
AA3
B
1274 1288Right-handed alpha
Helix 4
AA4
B
1298 1303Right-handed 310
Helix 5
AA5
B
1308 1312Right-handed 310
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There are 4 sheets in PDB entry 6O2K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1306 1307first strand
Strand 2
B
1385 1388anti-parallel
Strand 3
B
1354 1360anti-parallel
Strand 4
B
1404 1410anti-parallel
Strand 5
B
1333 1338anti-parallel
Strand 6
B
1320 1324anti-parallel
Strand 7
B
1315 1317anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1315 1317first strand
Strand 2
A
1320 1324anti-parallel
Strand 3
A
1333 1338anti-parallel
Strand 4
A
1404 1410anti-parallel
Strand 5
A
1354 1360anti-parallel
Strand 6
A
1385 1388anti-parallel
Strand 7
B
1306 1307anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1343 1348first strand
Strand 2
A
1393 1398anti-parallel
Strand 3
A
1363 1368anti-parallel
Strand 4
A
1376 1380anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1343 1348first strand
Strand 2
B
1393 1398anti-parallel
Strand 3
B
1362 1368anti-parallel
Strand 4
B
1376 1381anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il