Analysis of interatomic Contacts of Structural Units in PDB entry:
6O3C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O3C entry

There are 2 chains in PDB entry 6O3C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 65LEU 556
B
 GLN 1SER 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6O3C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
102 114Right-handed alpha
Helix 2
AA2
A
115 118Right-handed 310
Helix 3
AA3
A
119 134Right-handed alpha
Helix 4
AA4
A
147 153Right-handed alpha
Helix 5
AA5
A
158 165Right-handed alpha
Helix 6
AA6
A
168 172Right-handed 310
Helix 7
AA7
A
184 189Right-handed 310
Helix 8
AA8
A
206 210Right-handed 310
Helix 9
AA9
A
227 259Right-handed alpha
Helix 10
AB1
A
259 264Right-handed alpha
Helix 11
AB2
A
265 287Right-handed alpha
Helix 12
AB3
A
288 290Right-handed 310
Helix 13
AB4
A
292 299Right-handed alpha
Helix 14
AB5
A
316 349Right-handed alpha
Helix 15
AB6
A
360 369Right-handed alpha
Helix 16
AB7
A
370 383Right-handed alpha
Helix 17
AB8
A
402 407Right-handed alpha
Helix 18
AB9
A
408 437Right-handed alpha
Helix 19
AC1
A
443 499Right-handed alpha
Helix 20
AC2
A
518 538Right-handed alpha
Helix 21
AC3
A
539 541Right-handed 310
Helix 22
AC4
A
542 555Right-handed alpha
Helix 23
AC5
B
86 90Right-handed 310
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There are 8 sheets in PDB entry 6O3C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
142 144anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
91 92anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
85 86anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 203first strand
Strand 2
A
217 219anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 387first strand
Strand 2
A
394 396anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
67 72anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
116 121parallel
Strand 3
B
91 98anti-parallel
Strand 4
B
33 39anti-parallel
Strand 5
B
46 51anti-parallel
Strand 6
B
57 59anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
116 121parallel
Strand 3
B
91 98anti-parallel
Strand 4
B
110 112anti-parallel
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