Analysis of interatomic Contacts of Structural Units in PDB entry:
6O3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O3F entry

There are 2 chains in PDB entry 6O3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4ARG 520
B
 VAL 5ILE 521
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 6O3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 9Right-handed 310
Helix 2
AA2
A
10 26Right-handed alpha
Helix 3
AA3
A
40 49Right-handed alpha
Helix 4
AA4
A
55 61Right-handed alpha
Helix 5
AA5
A
115 123Right-handed alpha
Helix 6
AA6
A
167 177Right-handed alpha
Helix 7
AA7
A
177 185Right-handed alpha
Helix 8
AA8
A
185 209Right-handed alpha
Helix 9
AA9
A
236 239Right-handed 310
Helix 10
AB1
A
248 258Right-handed alpha
Helix 11
AB2
A
294 314Right-handed alpha
Helix 12
AB3
A
343 350Right-handed alpha
Helix 13
AB4
A
354 358Right-handed 310
Helix 14
AB5
A
359 371Right-handed alpha
Helix 15
AB6
A
374 379Right-handed alpha
Helix 16
AB7
A
382 395Right-handed alpha
Helix 17
AB8
A
396 399Right-handed 310
Helix 18
AB9
A
411 413Right-handed 310
Helix 19
AC1
A
448 465Right-handed alpha
Helix 20
AC2
A
475 486Right-handed alpha
Helix 21
AC3
A
496 504Right-handed alpha
Helix 22
AC4
A
508 512Right-handed 310
Helix 23
AC5
B
5 9Right-handed 310
Helix 24
AC6
B
10 26Right-handed alpha
Helix 25
AC7
B
40 49Right-handed alpha
Helix 26
AC8
B
55 61Right-handed alpha
Helix 27
AC9
B
115 124Right-handed alpha
Helix 28
AD1
B
167 175Right-handed alpha
Helix 29
AD2
B
177 185Right-handed alpha
Helix 30
AD3
B
185 209Right-handed alpha
Helix 31
AD4
B
248 258Right-handed alpha
Helix 32
AD5
B
294 314Right-handed alpha
Helix 33
AD6
B
343 352Right-handed alpha
Helix 34
AD7
B
354 358Right-handed 310
Helix 35
AD8
B
359 371Right-handed alpha
Helix 36
AD9
B
374 379Right-handed alpha
Helix 37
AE1
B
382 395Right-handed alpha
Helix 38
AE2
B
396 399Right-handed 310
Helix 39
AE3
B
409 413Right-handed 310
Helix 40
AE4
B
448 465Right-handed alpha
Helix 41
AE5
B
475 486Right-handed alpha
Helix 42
AE6
B
496 504Right-handed alpha
Helix 43
AE7
B
508 512Right-handed 310
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There are 8 sheets in PDB entry 6O3F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
144 155parallel
Strand 3
A
129 138anti-parallel
Strand 4
A
66 79anti-parallel
Strand 5
A
82 89anti-parallel
Strand 6
A
92 99anti-parallel
Strand 7
A
144 155parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 213first strand
Strand 2
A
262 270parallel
Strand 3
A
282 291anti-parallel
Strand 4
A
489 495anti-parallel
Strand 5
A
437 444anti-parallel
Strand 6
A
426 434anti-parallel
Strand 7
A
403 409anti-parallel
Strand 8
A
339 342parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 220first strand
Strand 2
A
240 244anti-parallel
Strand 3
A
232 235anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 322first strand
Strand 2
A
330 333anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 105first strand
Strand 2
B
144 155parallel
Strand 3
B
129 138anti-parallel
Strand 4
B
66 79anti-parallel
Strand 5
B
82 89anti-parallel
Strand 6
B
92 99anti-parallel
Strand 7
B
144 155parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 213first strand
Strand 2
B
262 270parallel
Strand 3
B
282 291anti-parallel
Strand 4
B
489 495anti-parallel
Strand 5
B
437 444anti-parallel
Strand 6
B
429 434anti-parallel
Strand 7
B
403 406anti-parallel
Strand 8
B
339 342parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 220first strand
Strand 2
B
240 244anti-parallel
Strand 3
B
232 235anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 322first strand
Strand 2
B
330 333anti-parallel
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