Analysis of interatomic Contacts of Structural Units in PDB entry:
6O3P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O3P entry

There are 2 chains in PDB entry 6O3P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 123	GLY 457
B	HIS 124	PRO 460

There are 28 helices in PDB entry 6O3P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	129	133	Right-handed 310
Helix 2	AA2	A	135	144	Right-handed alpha
Helix 3	AA3	A	165	169	Right-handed 310
Helix 4	AA4	A	180	189	Right-handed alpha
Helix 5	AA5	A	190	194	Right-handed 310
Helix 6	AA6	A	252	257	Right-handed alpha
Helix 7	AA7	A	258	260	Right-handed 310
Helix 8	AA8	A	261	281	Right-handed alpha
Helix 9	AA9	A	295	298	Right-handed 310
Helix 10	AB1	A	307	311	Right-handed 310
Helix 11	AB2	A	314	318	Right-handed 310
Helix 12	AB3	A	362	376	Right-handed alpha
Helix 13	AB4	A	424	432	Right-handed alpha
Helix 14	AB5	A	446	457	Right-handed alpha
Helix 15	AB6	B	129	133	Right-handed 310
Helix 16	AB7	B	135	144	Right-handed alpha
Helix 17	AB8	B	180	189	Right-handed alpha
Helix 18	AB9	B	190	192	Right-handed 310
Helix 19	AC1	B	233	242	Right-handed alpha
Helix 20	AC2	B	252	257	Right-handed alpha
Helix 21	AC3	B	258	260	Right-handed 310
Helix 22	AC4	B	261	281	Right-handed alpha
Helix 23	AC5	B	295	298	Right-handed 310
Helix 24	AC6	B	307	311	Right-handed 310
Helix 25	AC7	B	314	318	Right-handed 310
Helix 26	AC8	B	362	376	Right-handed alpha
Helix 27	AC9	B	424	432	Right-handed alpha
Helix 28	AD1	B	446	458	Right-handed alpha

There are 10 sheets in PDB entry 6O3P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	195	202	anti-parallel
Strand 3	A	226	232	anti-parallel
Strand 4	A	149	154	parallel
Strand 5	A	157	162	anti-parallel
Strand 6	A	174	176	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	195	202	anti-parallel
Strand 3	A	226	232	anti-parallel
Strand 4	A	149	154	parallel
Strand 5	A	157	162	anti-parallel
Strand 6	A	247	249	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	294	first strand
Strand 2	A	299	302	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	353	356	first strand
Strand 2	A	322	330	anti-parallel
Strand 3	A	395	404	parallel
Strand 4	A	379	390	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	353	356	first strand
Strand 2	A	322	330	anti-parallel
Strand 3	A	336	341	anti-parallel
Strand 4	A	418	423	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	194	202	anti-parallel
Strand 3	B	226	232	anti-parallel
Strand 4	B	149	154	parallel
Strand 5	B	157	162	anti-parallel
Strand 6	B	174	176	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	194	202	anti-parallel
Strand 3	B	226	232	anti-parallel
Strand 4	B	149	154	parallel
Strand 5	B	157	162	anti-parallel
Strand 6	B	247	249	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	294	first strand
Strand 2	B	299	302	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	356	first strand
Strand 2	B	322	330	anti-parallel
Strand 3	B	395	404	parallel
Strand 4	B	379	390	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	356	first strand
Strand 2	B	322	330	anti-parallel
Strand 3	B	336	341	anti-parallel
Strand 4	B	418	423	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O3P

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O3P