Analysis of interatomic Contacts of Structural Units in PDB entry:
6O3V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O3V entry

There are 2 chains in PDB entry 6O3V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 835
B	MET 1	ALA 373

There are104 helices in PDB entry 6O3V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	11	Right-handed 310
Helix 2	AA2	A	29	37	Right-handed alpha
Helix 3	AA3	A	49	59	Right-handed alpha
Helix 4	AA4	A	73	77	Right-handed 310
Helix 5	AA5	A	94	99	Right-handed 310
Helix 6	AA6	A	107	112	Right-handed 310
Helix 7	AA7	A	114	118	Right-handed 310
Helix 8	AA8	A	131	135	Right-handed 310
Helix 9	AA9	A	150	160	Right-handed alpha
Helix 10	AB1	A	164	179	Right-handed alpha
Helix 11	AB2	A	182	203	Right-handed alpha
Helix 12	AB3	A	212	216	Right-handed 310
Helix 13	AB4	A	217	222	Right-handed 310
Helix 14	AB5	A	234	241	Right-handed 310
Helix 15	AB6	A	256	276	Right-handed alpha
Helix 16	AB7	A	291	298	Right-handed alpha
Helix 17	AB8	A	327	331	Right-handed 310
Helix 18	AB9	A	349	374	Right-handed alpha
Helix 19	AC1	A	415	419	Right-handed alpha
Helix 20	AC2	A	426	437	Right-handed alpha
Helix 21	AC3	A	470	481	Right-handed alpha
Helix 22	AC4	A	511	515	Right-handed 310
Helix 23	AC5	A	524	532	Right-handed alpha
Helix 24	AC6	A	554	559	Right-handed 310
Helix 25	AC7	A	570	578	Right-handed alpha
Helix 26	AC8	A	585	595	Right-handed alpha
Helix 27	AC9	A	601	605	Right-handed 310
Helix 28	AD1	A	611	619	Right-handed alpha
Helix 29	AD2	A	619	624	Right-handed alpha
Helix 30	AD3	A	627	637	Right-handed alpha
Helix 31	AD4	A	651	670	Right-handed alpha
Helix 32	AD5	A	671	689	Right-handed alpha
Helix 33	AD6	A	727	729	Right-handed 310
Helix 34	AD7	A	730	741	Right-handed alpha
Helix 35	AD8	A	741	748	Right-handed alpha
Helix 36	AD9	A	770	784	Right-handed alpha
Helix 37	AE1	B	7	11	Right-handed 310
Helix 38	AE2	B	30	37	Right-handed alpha
Helix 39	AE3	B	49	59	Right-handed alpha
Helix 40	AE4	B	73	77	Right-handed 310
Helix 41	AE5	B	94	99	Right-handed 310
Helix 42	AE6	B	107	112	Right-handed 310
Helix 43	AE7	B	114	118	Right-handed 310
Helix 44	AE8	B	131	138	Right-handed 310
Helix 45	AE9	B	150	160	Right-handed alpha
Helix 46	AF1	B	164	179	Right-handed alpha
Helix 47	AF2	B	182	203	Right-handed alpha
Helix 48	AF3	B	217	222	Right-handed 310
Helix 49	AF4	B	234	241	Right-handed 310
Helix 50	AF5	B	256	276	Right-handed alpha
Helix 51	AF6	B	292	298	Right-handed alpha
Helix 52	AF7	B	318	322	Right-handed 310
Helix 53	AF8	B	327	331	Right-handed 310
Helix 54	AF9	B	349	374	Right-handed alpha
Helix 55	AG1	B	415	419	Right-handed alpha
Helix 56	AG2	B	426	437	Right-handed alpha
Helix 57	AG3	B	470	481	Right-handed alpha
Helix 58	AG4	B	511	515	Right-handed 310
Helix 59	AG5	B	524	532	Right-handed alpha
Helix 60	AG6	B	554	559	Right-handed 310
Helix 61	AG7	B	570	579	Right-handed alpha
Helix 62	AG8	B	585	595	Right-handed alpha
Helix 63	AG9	B	612	619	Right-handed alpha
Helix 64	AH1	B	619	624	Right-handed alpha
Helix 65	AH2	B	627	637	Right-handed alpha
Helix 66	AH3	B	651	670	Right-handed alpha
Helix 67	AH4	B	671	689	Right-handed alpha
Helix 68	AH5	B	727	729	Right-handed 310
Helix 69	AH6	B	730	741	Right-handed alpha
Helix 70	AH7	B	741	748	Right-handed alpha
Helix 71	AH8	B	770	784	Right-handed alpha
Helix 72	AH9	C	28	37	Right-handed alpha
Helix 73	AI1	C	49	60	Right-handed alpha
Helix 74	AI2	C	73	77	Right-handed 310
Helix 75	AI3	C	94	99	Right-handed 310
Helix 76	AI4	C	107	112	Right-handed 310
Helix 77	AI5	C	114	118	Right-handed 310
Helix 78	AI6	C	131	135	Right-handed 310
Helix 79	AI7	C	150	161	Right-handed alpha
Helix 80	AI8	C	164	179	Right-handed alpha
Helix 81	AI9	C	182	203	Right-handed alpha
Helix 82	AJ1	C	212	222	Right-handed 310
Helix 83	AJ2	C	234	241	Right-handed 310
Helix 84	AJ3	C	256	276	Right-handed alpha
Helix 85	AJ4	C	292	298	Right-handed alpha
Helix 86	AJ5	C	327	331	Right-handed 310
Helix 87	AJ6	C	349	374	Right-handed alpha
Helix 88	AJ7	C	415	419	Right-handed alpha
Helix 89	AJ8	C	426	437	Right-handed alpha
Helix 90	AJ9	C	470	481	Right-handed alpha
Helix 91	AK1	C	493	497	Right-handed 310
Helix 92	AK2	C	511	515	Right-handed 310
Helix 93	AK3	C	524	532	Right-handed alpha
Helix 94	AK4	C	570	579	Right-handed alpha
Helix 95	AK5	C	585	595	Right-handed alpha
Helix 96	AK6	C	612	619	Right-handed alpha
Helix 97	AK7	C	619	624	Right-handed alpha
Helix 98	AK8	C	627	637	Right-handed alpha
Helix 99	AK9	C	651	670	Right-handed alpha
Helix 100	AL1	C	671	689	Right-handed alpha
Helix 101	AL2	C	727	729	Right-handed 310
Helix 102	AL3	C	730	741	Right-handed alpha
Helix 103	AL4	C	741	748	Right-handed alpha
Helix 104	AL5	C	770	784	Right-handed alpha

There are 30 sheets in PDB entry 6O3V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	22	first strand
Strand 2	A	42	45	parallel
Strand 3	A	2	6	parallel
Strand 4	A	63	66	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	146	first strand
Strand 2	A	88	91	parallel
Strand 3	A	80	83	anti-parallel
Strand 4	A	534	536	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	104	first strand
Strand 2	A	123	126	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	228	first strand
Strand 2	A	206	209	parallel
Strand 3	A	457	460	parallel
Strand 4	A	484	490	parallel
Strand 5	A	505	510	parallel
Strand 6	A	499	502	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	228	first strand
Strand 2	A	206	209	parallel
Strand 3	A	457	460	parallel
Strand 4	A	484	490	parallel
Strand 5	A	547	552	anti-parallel
Strand 6	A	520	523	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	250	first strand
Strand 2	A	404	405	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	307	first strand
Strand 2	A	281	286	parallel
Strand 3	A	334	340	parallel
Strand 4	A	377	385	parallel
Strand 5	A	408	414	anti-parallel
Strand 6	A	396	398	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	392	first strand
Strand 2	A	422	425	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	787	788	first strand
Strand 2	A	719	725	anti-parallel
Strand 3	A	699	704	anti-parallel
Strand 4	A	819	824	anti-parallel
Strand 5	A	830	832	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	797	801	first strand
Strand 2	A	762	766	anti-parallel
Strand 3	A	751	759	anti-parallel
Strand 4	A	809	814	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	22	first strand
Strand 2	B	43	45	parallel
Strand 3	B	3	5	parallel
Strand 4	B	63	65	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	146	first strand
Strand 2	B	88	91	parallel
Strand 3	B	80	83	anti-parallel
Strand 4	B	534	536	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	104	first strand
Strand 2	B	123	126	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	228	first strand
Strand 2	B	206	209	parallel
Strand 3	B	457	460	parallel
Strand 4	B	484	489	parallel
Strand 5	B	547	552	anti-parallel
Strand 6	B	520	523	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	249	250	first strand
Strand 2	B	404	405	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	306	307	first strand
Strand 2	B	281	286	parallel
Strand 3	B	335	340	parallel
Strand 4	B	379	385	parallel
Strand 5	B	408	414	anti-parallel
Strand 6	B	396	398	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	392	first strand
Strand 2	B	422	425	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	499	502	first strand
Strand 2	B	505	508	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	724	first strand
Strand 2	B	699	703	anti-parallel
Strand 3	B	821	824	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	797	801	first strand
Strand 2	B	762	766	anti-parallel
Strand 3	B	751	759	anti-parallel
Strand 4	B	809	814	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	22	first strand
Strand 2	C	43	45	parallel
Strand 3	C	3	6	parallel
Strand 4	C	63	66	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	146	first strand
Strand 2	C	88	91	parallel
Strand 3	C	80	83	anti-parallel
Strand 4	C	534	536	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	104	first strand
Strand 2	C	123	126	parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	226	228	first strand
Strand 2	C	206	209	parallel
Strand 3	C	457	460	parallel
Strand 4	C	484	489	parallel
Strand 5	C	547	552	anti-parallel
Strand 6	C	520	523	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	249	250	first strand
Strand 2	C	404	405	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	317	320	first strand
Strand 2	C	304	307	parallel
Strand 3	C	281	286	parallel
Strand 4	C	335	340	parallel
Strand 5	C	378	385	parallel
Strand 6	C	408	414	anti-parallel
Strand 7	C	396	398	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	389	392	first strand
Strand 2	C	422	425	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	499	502	first strand
Strand 2	C	505	508	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	787	788	first strand
Strand 2	C	718	725	anti-parallel
Strand 3	C	699	705	anti-parallel
Strand 4	C	817	824	anti-parallel
Strand 5	C	830	832	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	797	801	first strand
Strand 2	C	762	766	anti-parallel
Strand 3	C	751	759	anti-parallel
Strand 4	C	808	814	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O3V

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O3V