Analysis of interatomic Contacts of Structural Units in PDB entry:
6O58

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O58 entry

There are 16 chains in PDB entry 6O58 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
K	ASP 74	HIS 341
L	VAL 48	ASP 96
O	VAL 75	ASP 336
P	VAL 48	HIS 95
M	ASP 74	PRO 343
N	VAL 48	ASP 96
G	VAL 75	ASP 336
H	VAL 48	HIS 95
I	ASP 74	GLN 346
J	VAL 48	ASP 96
C	ASP 74	HIS 341
D	VAL 48	ASP 96
A	ASP 74	GLN 346
B	VAL 48	ASP 96
E	ASP 74	PRO 343
F	VAL 48	ASP 96

There are 77 helices in PDB entry 6O58. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	K	91	94	Right-handed 310
Helix 2	AA2	K	107	119	Right-handed alpha
Helix 3	AA3	K	140	145	Right-handed alpha
Helix 4	AA4	K	172	189	Right-handed alpha
Helix 5	AA5	K	191	215	Right-handed alpha
Helix 6	AA6	K	217	257	Right-handed alpha
Helix 7	AA7	K	259	286	Right-handed alpha
Helix 8	AA8	K	290	310	Right-handed alpha
Helix 9	AA9	K	313	335	Right-handed alpha
Helix 10	AB1	L	66	94	Right-handed alpha
Helix 11	AB2	O	107	119	Right-handed alpha
Helix 12	AB3	O	179	188	Right-handed alpha
Helix 13	AB4	O	188	256	Right-handed alpha
Helix 14	AB5	O	259	286	Right-handed alpha
Helix 15	AB6	O	290	309	Right-handed alpha
Helix 16	AB7	O	313	336	Right-handed alpha
Helix 17	AB8	P	65	95	Right-handed alpha
Helix 18	AB9	M	107	119	Right-handed alpha
Helix 19	AC1	M	140	144	Right-handed 310
Helix 20	AC2	M	169	190	Right-handed alpha
Helix 21	AC3	M	191	246	Right-handed alpha
Helix 22	AC4	M	246	254	Right-handed alpha
Helix 23	AC5	M	263	285	Right-handed alpha
Helix 24	AC6	M	290	310	Right-handed alpha
Helix 25	AC7	M	314	333	Right-handed alpha
Helix 26	AC8	N	70	96	Right-handed alpha
Helix 27	AC9	G	107	117	Right-handed alpha
Helix 28	AD1	G	140	145	Right-handed alpha
Helix 29	AD2	G	179	188	Right-handed alpha
Helix 30	AD3	G	188	256	Right-handed alpha
Helix 31	AD4	G	259	286	Right-handed alpha
Helix 32	AD5	G	290	309	Right-handed alpha
Helix 33	AD6	G	313	336	Right-handed alpha
Helix 34	AD7	H	65	95	Right-handed alpha
Helix 35	AD8	I	107	119	Right-handed alpha
Helix 36	AD9	I	140	145	Right-handed alpha
Helix 37	AE1	I	172	191	Right-handed alpha
Helix 38	AE2	I	191	213	Right-handed alpha
Helix 39	AE3	I	213	250	Right-handed alpha
Helix 40	AE4	I	251	256	Right-handed alpha
Helix 41	AE5	I	259	285	Right-handed alpha
Helix 42	AE6	I	290	293	Right-handed 310
Helix 43	AE7	I	294	310	Right-handed alpha
Helix 44	AE8	I	313	340	Right-handed alpha
Helix 45	AE9	J	67	75	Right-handed alpha
Helix 46	AF1	J	75	96	Right-handed alpha
Helix 47	AF2	C	91	94	Right-handed 310
Helix 48	AF3	C	107	119	Right-handed alpha
Helix 49	AF4	C	140	145	Right-handed alpha
Helix 50	AF5	C	172	189	Right-handed alpha
Helix 51	AF6	C	191	215	Right-handed alpha
Helix 52	AF7	C	217	257	Right-handed alpha
Helix 53	AF8	C	259	286	Right-handed alpha
Helix 54	AF9	C	290	310	Right-handed alpha
Helix 55	AG1	C	313	335	Right-handed alpha
Helix 56	AG2	D	66	94	Right-handed alpha
Helix 57	AG3	A	107	119	Right-handed alpha
Helix 58	AG4	A	140	145	Right-handed alpha
Helix 59	AG5	A	172	191	Right-handed alpha
Helix 60	AG6	A	191	213	Right-handed alpha
Helix 61	AG7	A	213	250	Right-handed alpha
Helix 62	AG8	A	251	256	Right-handed alpha
Helix 63	AG9	A	263	285	Right-handed alpha
Helix 64	AH1	A	290	310	Right-handed alpha
Helix 65	AH2	A	313	334	Right-handed alpha
Helix 66	AH3	A	334	340	Right-handed alpha
Helix 67	AH4	B	65	75	Right-handed alpha
Helix 68	AH5	B	75	96	Right-handed alpha
Helix 69	AH6	E	107	119	Right-handed alpha
Helix 70	AH7	E	140	144	Right-handed 310
Helix 71	AH8	E	169	190	Right-handed alpha
Helix 72	AH9	E	191	246	Right-handed alpha
Helix 73	AI1	E	246	254	Right-handed alpha
Helix 74	AI2	E	263	285	Right-handed alpha
Helix 75	AI3	E	290	310	Right-handed alpha
Helix 76	AI4	E	314	333	Right-handed alpha
Helix 77	AI5	F	70	96	Right-handed alpha

There are 16 sheets in PDB entry 6O58. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	76	80	first strand
Strand 2	K	83	89	anti-parallel
Strand 3	K	96	100	anti-parallel
Strand 4	M	134	135	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	126	128	first strand
Strand 2	K	149	152	anti-parallel
Strand 3	K	157	160	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	134	135	first strand
Strand 2	I	96	100	parallel
Strand 3	I	83	89	anti-parallel
Strand 4	I	76	80	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	77	78	first strand
Strand 2	O	85	88	anti-parallel
Strand 3	O	97	100	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	125	128	first strand
Strand 2	O	149	153	anti-parallel
Strand 3	O	157	160	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	134	135	first strand
Strand 2	M	96	100	parallel
Strand 3	M	83	89	anti-parallel
Strand 4	M	76	80	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	126	127	first strand
Strand 2	M	149	152	anti-parallel
Strand 3	M	158	160	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	76	78	first strand
Strand 2	G	85	88	anti-parallel
Strand 3	G	97	100	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	125	128	first strand
Strand 2	G	149	153	anti-parallel
Strand 3	G	157	160	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	134	135	first strand
Strand 2	E	97	100	parallel
Strand 3	E	83	88	anti-parallel
Strand 4	E	76	80	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	126	128	first strand
Strand 2	I	149	153	anti-parallel
Strand 3	I	156	160	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	80	first strand
Strand 2	C	83	89	anti-parallel
Strand 3	C	96	100	anti-parallel
Strand 4	E	134	135	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	128	first strand
Strand 2	C	149	152	anti-parallel
Strand 3	C	157	160	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	135	first strand
Strand 2	A	96	100	parallel
Strand 3	A	83	89	anti-parallel
Strand 4	A	76	80	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	128	first strand
Strand 2	A	149	153	anti-parallel
Strand 3	A	156	160	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	127	first strand
Strand 2	E	149	152	anti-parallel
Strand 3	E	158	160	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O58

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O58