Analysis of interatomic Contacts of Structural Units in PDB entry:
6O59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O59 entry

There are 2 chains in PDB entry 6O59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 25PHE 296
B
 GLY 171PHE 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6O59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 45Right-handed alpha
Helix 2
AA2
A
77 87Right-handed alpha
Helix 3
AA3
A
101 111Right-handed alpha
Helix 4
AA4
A
121 131Right-handed alpha
Helix 5
AA5
A
176 188Right-handed alpha
Helix 6
AA6
A
218 231Right-handed alpha
Helix 7
AA7
A
233 240Right-handed alpha
Helix 8
AA8
A
242 249Right-handed alpha
Helix 9
AA9
A
263 273Right-handed alpha
Helix 10
AB1
B
176 188Right-handed alpha
Helix 11
AB2
B
218 231Right-handed alpha
Helix 12
AB3
B
233 240Right-handed alpha
Helix 13
AB4
B
242 248Right-handed alpha
Helix 14
AB5
B
263 273Right-handed alpha
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There are 3 sheets in PDB entry 6O59. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 58first strand
Strand 2
A
64 71anti-parallel
Strand 3
A
134 138anti-parallel
Strand 4
A
144 148anti-parallel
Strand 5
A
115 119anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 200first strand
Strand 2
A
206 213anti-parallel
Strand 3
A
276 280anti-parallel
Strand 4
A
286 289anti-parallel
Strand 5
A
259 261anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 200first strand
Strand 2
B
206 213anti-parallel
Strand 3
B
276 280anti-parallel
Strand 4
B
286 289anti-parallel
Strand 5
B
259 261anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il