Analysis of interatomic Contacts of Structural Units in PDB entry:
6O5B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O5B entry

There are 12 chains in PDB entry 6O5B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
J	ASP 74	LYS 164
K	ASP 74	LYS 164
E	ASP 74	PRO 343
F	VAL 48	ASP 96
C	ASP 74	HIS 341
D	VAL 48	ASP 96
A	ASP 74	GLN 346
B	VAL 48	ASP 96
L	ASP 74	LYS 164
I	ASP 74	LYS 164
G	VAL 75	ASP 336
H	VAL 48	HIS 95

There are 51 helices in PDB entry 6O5B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	J	107	112	Right-handed alpha
Helix 2	AA2	J	140	147	Right-handed alpha
Helix 3	AA3	K	107	119	Right-handed alpha
Helix 4	AA4	K	140	145	Right-handed alpha
Helix 5	AA5	E	107	119	Right-handed alpha
Helix 6	AA6	E	140	144	Right-handed 310
Helix 7	AA7	E	169	190	Right-handed alpha
Helix 8	AA8	E	191	253	Right-handed alpha
Helix 9	AA9	E	263	285	Right-handed alpha
Helix 10	AB1	E	292	310	Right-handed alpha
Helix 11	AB2	E	313	328	Right-handed alpha
Helix 12	AB3	E	328	335	Right-handed alpha
Helix 13	AB4	F	65	96	Right-handed alpha
Helix 14	AB5	C	91	94	Right-handed 310
Helix 15	AB6	C	107	119	Right-handed alpha
Helix 16	AB7	C	140	145	Right-handed alpha
Helix 17	AB8	C	172	177	Right-handed alpha
Helix 18	AB9	C	178	190	Right-handed alpha
Helix 19	AC1	C	191	214	Right-handed alpha
Helix 20	AC2	C	217	257	Right-handed alpha
Helix 21	AC3	C	262	284	Right-handed alpha
Helix 22	AC4	C	294	311	Right-handed alpha
Helix 23	AC5	C	313	335	Right-handed alpha
Helix 24	AC6	D	65	96	Right-handed alpha
Helix 25	AC7	A	107	118	Right-handed alpha
Helix 26	AC8	A	140	145	Right-handed alpha
Helix 27	AC9	A	171	174	Right-handed 310
Helix 28	AD1	A	175	192	Right-handed alpha
Helix 29	AD2	A	192	215	Right-handed alpha
Helix 30	AD3	A	217	226	Right-handed alpha
Helix 31	AD4	A	227	256	Right-handed alpha
Helix 32	AD5	A	263	285	Right-handed alpha
Helix 33	AD6	A	291	310	Right-handed alpha
Helix 34	AD7	A	314	340	Right-handed alpha
Helix 35	AD8	B	66	71	Right-handed alpha
Helix 36	AD9	B	73	96	Right-handed alpha
Helix 37	AE1	L	107	119	Right-handed alpha
Helix 38	AE2	L	140	145	Right-handed alpha
Helix 39	AE3	I	107	117	Right-handed alpha
Helix 40	AE4	I	140	144	Right-handed 310
Helix 41	AE5	G	107	117	Right-handed alpha
Helix 42	AE6	G	140	145	Right-handed alpha
Helix 43	AE7	G	179	189	Right-handed alpha
Helix 44	AE8	G	192	257	Right-handed alpha
Helix 45	AE9	G	259	262	Right-handed 310
Helix 46	AF1	G	263	286	Right-handed alpha
Helix 47	AF2	G	290	305	Right-handed alpha
Helix 48	AF3	G	305	310	Right-handed alpha
Helix 49	AF4	G	313	334	Right-handed alpha
Helix 50	AF5	H	65	75	Right-handed alpha
Helix 51	AF6	H	75	93	Right-handed alpha

There are 17 sheets in PDB entry 6O5B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	76	80	first strand
Strand 2	J	83	89	anti-parallel
Strand 3	J	96	100	anti-parallel
Strand 4	K	134	135	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	125	128	first strand
Strand 2	J	149	153	anti-parallel
Strand 3	J	156	160	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	134	135	first strand
Strand 2	I	95	98	parallel
Strand 3	I	83	90	anti-parallel
Strand 4	I	76	80	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	76	80	first strand
Strand 2	K	83	89	anti-parallel
Strand 3	K	96	100	anti-parallel
Strand 4	L	134	135	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	126	128	first strand
Strand 2	K	149	153	anti-parallel
Strand 3	K	156	160	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	80	first strand
Strand 2	E	83	89	anti-parallel
Strand 3	E	96	100	anti-parallel
Strand 4	G	134	135	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	125	127	first strand
Strand 2	E	149	153	anti-parallel
Strand 3	E	158	160	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	135	first strand
Strand 2	C	96	100	parallel
Strand 3	C	83	89	anti-parallel
Strand 4	C	77	80	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	128	first strand
Strand 2	C	149	153	anti-parallel
Strand 3	C	156	160	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	135	first strand
Strand 2	A	96	100	parallel
Strand 3	A	83	89	anti-parallel
Strand 4	A	76	80	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	128	first strand
Strand 2	A	150	153	anti-parallel
Strand 3	A	156	159	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	78	80	first strand
Strand 2	L	83	85	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	87	90	first strand
Strand 2	L	95	98	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	125	128	first strand
Strand 2	L	149	153	anti-parallel
Strand 3	L	158	160	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	126	128	first strand
Strand 2	I	150	152	anti-parallel
Strand 3	I	157	158	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	86	88	first strand
Strand 2	G	97	99	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	125	128	first strand
Strand 2	G	150	153	anti-parallel
Strand 3	G	156	159	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O5B

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O5B