Analysis of interatomic Contacts of Structural Units in PDB entry:
6O5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O5Z entry

There are 2 chains in PDB entry 6O5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 191SER 470
B
 GLN 190SER 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6O5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
197 202Right-handed 310
Helix 2
AA2
A
240 257Right-handed alpha
Helix 3
AA3
A
290 298Right-handed alpha
Helix 4
AA4
A
302 323Right-handed alpha
Helix 5
AA5
A
333 335Right-handed 310
Helix 6
AA6
A
372 377Right-handed 310
Helix 7
AA7
A
378 384Right-handed alpha
Helix 8
AA8
A
390 408Right-handed alpha
Helix 9
AA9
A
416 426Right-handed alpha
Helix 10
AB1
A
438 449Right-handed alpha
Helix 11
AB2
A
452 456Right-handed 310
Helix 12
AB3
A
458 469Right-handed alpha
Helix 13
AB4
B
197 202Right-handed 310
Helix 14
AB5
B
242 257Right-handed alpha
Helix 15
AB6
B
290 298Right-handed alpha
Helix 16
AB7
B
302 323Right-handed alpha
Helix 17
AB8
B
333 335Right-handed 310
Helix 18
AB9
B
372 377Right-handed 310
Helix 19
AC1
B
378 384Right-handed alpha
Helix 20
AC2
B
390 408Right-handed alpha
Helix 21
AC3
B
416 426Right-handed alpha
Helix 22
AC4
B
438 449Right-handed alpha
Helix 23
AC5
B
452 456Right-handed 310
Helix 24
AC6
B
458 467Right-handed alpha
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There are 4 sheets in PDB entry 6O5Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 211first strand
Strand 2
A
215 222anti-parallel
Strand 3
A
225 232anti-parallel
Strand 4
A
278 284anti-parallel
Strand 5
A
265 271anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 339first strand
Strand 2
A
345 347anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 211first strand
Strand 2
B
215 222anti-parallel
Strand 3
B
225 232anti-parallel
Strand 4
B
278 284anti-parallel
Strand 5
B
265 271anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 339first strand
Strand 2
B
345 347anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il