Analysis of interatomic Contacts of Structural Units in PDB entry:
6O63

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O63 entry

There are 4 chains in PDB entry 6O63 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 37	GLU 330
B	PHE 40	SER 331
C	THR 42	GLU 330
D	SER 41	SER 331

There are 46 helices in PDB entry 6O63. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	102	116	Right-handed alpha
Helix 2	AA2	A	132	140	Right-handed alpha
Helix 3	AA3	A	153	164	Right-handed alpha
Helix 4	AA4	A	164	169	Right-handed alpha
Helix 5	AA5	A	170	173	Right-handed 310
Helix 6	AA6	A	182	189	Right-handed alpha
Helix 7	AA7	A	209	213	Right-handed 310
Helix 8	AA8	A	214	224	Right-handed alpha
Helix 9	AA9	A	241	256	Right-handed alpha
Helix 10	AB1	A	270	272	Right-handed 310
Helix 11	AB2	A	295	299	Right-handed 310
Helix 12	AB3	A	311	318	Right-handed alpha
Helix 13	AB4	A	322	330	Right-handed alpha
Helix 14	AB5	B	102	116	Right-handed alpha
Helix 15	AB6	B	132	140	Right-handed alpha
Helix 16	AB7	B	153	164	Right-handed alpha
Helix 17	AB8	B	167	173	Right-handed 310
Helix 18	AB9	B	182	189	Right-handed alpha
Helix 19	AC1	B	209	213	Right-handed 310
Helix 20	AC2	B	214	224	Right-handed alpha
Helix 21	AC3	B	241	256	Right-handed alpha
Helix 22	AC4	B	270	272	Right-handed 310
Helix 23	AC5	B	311	318	Right-handed alpha
Helix 24	AC6	B	322	331	Right-handed alpha
Helix 25	AC7	C	102	116	Right-handed alpha
Helix 26	AC8	C	132	140	Right-handed alpha
Helix 27	AC9	C	153	164	Right-handed alpha
Helix 28	AD1	C	164	169	Right-handed alpha
Helix 29	AD2	C	170	173	Right-handed 310
Helix 30	AD3	C	182	189	Right-handed alpha
Helix 31	AD4	C	209	213	Right-handed 310
Helix 32	AD5	C	214	224	Right-handed alpha
Helix 33	AD6	C	241	256	Right-handed alpha
Helix 34	AD7	C	270	272	Right-handed 310
Helix 35	AD8	C	311	318	Right-handed alpha
Helix 36	AD9	C	322	330	Right-handed alpha
Helix 37	AE1	D	102	116	Right-handed alpha
Helix 38	AE2	D	132	140	Right-handed alpha
Helix 39	AE3	D	153	164	Right-handed alpha
Helix 40	AE4	D	182	190	Right-handed alpha
Helix 41	AE5	D	206	213	Right-handed 310
Helix 42	AE6	D	214	224	Right-handed alpha
Helix 43	AE7	D	241	256	Right-handed alpha
Helix 44	AE8	D	270	272	Right-handed 310
Helix 45	AE9	D	311	318	Right-handed alpha
Helix 46	AF1	D	322	331	Right-handed alpha

There are 9 sheets in PDB entry 6O63. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	B	41	42	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	50	first strand
Strand 2	A	58	72	anti-parallel
Strand 3	B	58	72	anti-parallel
Strand 4	B	47	49	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	95	99	first strand
Strand 2	A	88	92	anti-parallel
Strand 3	A	77	83	anti-parallel
Strand 4	A	58	72	anti-parallel
Strand 5	B	58	72	anti-parallel
Strand 6	B	77	83	anti-parallel
Strand 7	B	88	92	anti-parallel
Strand 8	B	95	99	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	180	first strand
Strand 2	A	146	151	parallel
Strand 3	A	123	127	parallel
Strand 4	A	195	200	parallel
Strand 5	A	225	234	parallel
Strand 6	A	274	281	anti-parallel
Strand 7	A	260	266	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	180	first strand
Strand 2	B	146	151	parallel
Strand 3	B	123	127	parallel
Strand 4	B	195	200	parallel
Strand 5	B	225	234	parallel
Strand 6	B	274	281	anti-parallel
Strand 7	B	260	266	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	50	first strand
Strand 2	C	58	72	anti-parallel
Strand 3	D	58	72	anti-parallel
Strand 4	D	47	49	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	99	first strand
Strand 2	C	88	92	anti-parallel
Strand 3	C	77	83	anti-parallel
Strand 4	C	58	72	anti-parallel
Strand 5	D	58	72	anti-parallel
Strand 6	D	77	83	anti-parallel
Strand 7	D	88	92	anti-parallel
Strand 8	D	95	99	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	180	first strand
Strand 2	C	146	151	parallel
Strand 3	C	123	127	parallel
Strand 4	C	195	200	parallel
Strand 5	C	225	234	parallel
Strand 6	C	274	281	anti-parallel
Strand 7	C	260	266	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	176	180	first strand
Strand 2	D	146	151	parallel
Strand 3	D	123	127	parallel
Strand 4	D	195	200	parallel
Strand 5	D	225	234	parallel
Strand 6	D	274	281	anti-parallel
Strand 7	D	260	266	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O63

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O63