Analysis of interatomic Contacts of Structural Units in PDB entry:
6O64

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O64 entry

There are 5 chains in PDB entry 6O64 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 43	SER 337
B	SER 42	SER 337
C	PRO 49	SER 337
D	PRO 49	ASP 336
E	SER 46	GLY 211

There are 95 helices in PDB entry 6O64. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	107	120	Right-handed alpha
Helix 2	AA2	A	136	144	Right-handed alpha
Helix 3	AA3	A	157	168	Right-handed alpha
Helix 4	AA4	A	168	173	Right-handed alpha
Helix 5	AA5	A	174	177	Right-handed 310
Helix 6	AA6	A	186	193	Right-handed alpha
Helix 7	AA7	A	212	217	Right-handed 310
Helix 8	AA8	A	218	228	Right-handed alpha
Helix 9	AA9	A	245	260	Right-handed alpha
Helix 10	AB1	A	274	276	Right-handed 310
Helix 11	AB2	A	317	324	Right-handed alpha
Helix 12	AB3	A	328	336	Right-handed alpha
Helix 13	AB4	B	106	120	Right-handed alpha
Helix 14	AB5	B	136	144	Right-handed alpha
Helix 15	AB6	B	157	168	Right-handed alpha
Helix 16	AB7	B	168	173	Right-handed alpha
Helix 17	AB8	B	174	177	Right-handed 310
Helix 18	AB9	B	186	193	Right-handed alpha
Helix 19	AC1	B	213	217	Right-handed 310
Helix 20	AC2	B	218	228	Right-handed alpha
Helix 21	AC3	B	245	260	Right-handed alpha
Helix 22	AC4	B	274	276	Right-handed 310
Helix 23	AC5	B	317	324	Right-handed alpha
Helix 24	AC6	B	328	336	Right-handed alpha
Helix 25	AC7	C	106	120	Right-handed alpha
Helix 26	AC8	C	136	143	Right-handed alpha
Helix 27	AC9	C	157	168	Right-handed alpha
Helix 28	AD1	C	168	173	Right-handed alpha
Helix 29	AD2	C	174	177	Right-handed 310
Helix 30	AD3	C	186	193	Right-handed alpha
Helix 31	AD4	C	213	217	Right-handed 310
Helix 32	AD5	C	218	228	Right-handed alpha
Helix 33	AD6	C	245	260	Right-handed alpha
Helix 34	AD7	C	274	276	Right-handed 310
Helix 35	AD8	C	317	324	Right-handed alpha
Helix 36	AD9	C	328	337	Right-handed alpha
Helix 37	AE1	D	106	120	Right-handed alpha
Helix 38	AE2	D	136	144	Right-handed alpha
Helix 39	AE3	D	157	168	Right-handed alpha
Helix 40	AE4	D	168	173	Right-handed alpha
Helix 41	AE5	D	174	176	Right-handed 310
Helix 42	AE6	D	186	194	Right-handed alpha
Helix 43	AE7	D	214	217	Right-handed 310
Helix 44	AE8	D	218	228	Right-handed alpha
Helix 45	AE9	D	245	260	Right-handed alpha
Helix 46	AF1	D	274	276	Right-handed 310
Helix 47	AF2	D	317	324	Right-handed alpha
Helix 48	AF3	D	328	336	Right-handed alpha
Helix 49	AF4	E	106	120	Right-handed alpha
Helix 50	AF5	E	136	144	Right-handed alpha
Helix 51	AF6	E	157	168	Right-handed alpha
Helix 52	AF7	E	168	173	Right-handed alpha
Helix 53	AF8	E	174	177	Right-handed 310
Helix 54	AF9	E	186	193	Right-handed alpha
Helix 55	AG1	E	213	217	Right-handed 310
Helix 56	AG2	E	218	228	Right-handed alpha
Helix 57	AG3	E	245	260	Right-handed alpha
Helix 58	AG4	E	274	276	Right-handed 310
Helix 59	AG5	E	317	324	Right-handed alpha
Helix 60	AG6	E	328	336	Right-handed alpha
Helix 61	AG7	F	106	120	Right-handed alpha
Helix 62	AG8	F	136	143	Right-handed alpha
Helix 63	AG9	F	157	168	Right-handed alpha
Helix 64	AH1	F	168	173	Right-handed alpha
Helix 65	AH2	F	174	177	Right-handed 310
Helix 66	AH3	F	186	193	Right-handed alpha
Helix 67	AH4	F	211	217	Right-handed 310
Helix 68	AH5	F	218	228	Right-handed alpha
Helix 69	AH6	F	245	260	Right-handed alpha
Helix 70	AH7	F	274	276	Right-handed 310
Helix 71	AH8	F	317	324	Right-handed alpha
Helix 72	AH9	F	328	337	Right-handed alpha
Helix 73	AI1	G	106	120	Right-handed alpha
Helix 74	AI2	G	136	144	Right-handed alpha
Helix 75	AI3	G	157	168	Right-handed alpha
Helix 76	AI4	G	168	173	Right-handed alpha
Helix 77	AI5	G	174	177	Right-handed 310
Helix 78	AI6	G	186	194	Right-handed alpha
Helix 79	AI7	G	210	217	Right-handed 310
Helix 80	AI8	G	218	228	Right-handed alpha
Helix 81	AI9	G	245	260	Right-handed alpha
Helix 82	AJ1	G	274	276	Right-handed 310
Helix 83	AJ2	G	317	324	Right-handed alpha
Helix 84	AJ3	G	328	336	Right-handed alpha
Helix 85	AJ4	H	106	120	Right-handed alpha
Helix 86	AJ5	H	136	144	Right-handed alpha
Helix 87	AJ6	H	157	168	Right-handed alpha
Helix 88	AJ7	H	168	173	Right-handed alpha
Helix 89	AJ8	H	174	177	Right-handed 310
Helix 90	AJ9	H	186	194	Right-handed alpha
Helix 91	AK1	H	213	217	Right-handed 310
Helix 92	AK2	H	218	228	Right-handed alpha
Helix 93	AK3	H	247	260	Right-handed alpha
Helix 94	AK4	H	317	324	Right-handed alpha
Helix 95	AK5	H	328	332	Right-handed 310

There are 16 sheets in PDB entry 6O64. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	53	first strand
Strand 2	A	62	76	anti-parallel
Strand 3	B	62	76	anti-parallel
Strand 4	B	51	53	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	103	first strand
Strand 2	A	92	96	anti-parallel
Strand 3	A	81	87	anti-parallel
Strand 4	A	62	76	anti-parallel
Strand 5	B	62	76	anti-parallel
Strand 6	B	81	87	anti-parallel
Strand 7	B	92	96	anti-parallel
Strand 8	B	99	103	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	180	183	first strand
Strand 2	A	150	154	parallel
Strand 3	A	127	131	parallel
Strand 4	A	199	204	parallel
Strand 5	A	229	238	parallel
Strand 6	A	278	285	anti-parallel
Strand 7	A	264	270	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	184	first strand
Strand 2	B	150	155	parallel
Strand 3	B	127	131	parallel
Strand 4	B	199	204	parallel
Strand 5	B	229	238	parallel
Strand 6	B	278	285	anti-parallel
Strand 7	B	264	270	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	53	first strand
Strand 2	C	62	76	anti-parallel
Strand 3	D	62	76	anti-parallel
Strand 4	D	51	53	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	99	103	first strand
Strand 2	C	92	96	anti-parallel
Strand 3	C	81	87	anti-parallel
Strand 4	C	62	76	anti-parallel
Strand 5	D	62	76	anti-parallel
Strand 6	D	81	87	anti-parallel
Strand 7	D	92	96	anti-parallel
Strand 8	D	99	103	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	180	184	first strand
Strand 2	C	150	155	parallel
Strand 3	C	127	131	parallel
Strand 4	C	199	204	parallel
Strand 5	C	229	238	parallel
Strand 6	C	278	285	anti-parallel
Strand 7	C	264	270	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	180	184	first strand
Strand 2	D	150	155	parallel
Strand 3	D	127	131	parallel
Strand 4	D	199	204	parallel
Strand 5	D	229	238	parallel
Strand 6	D	278	285	anti-parallel
Strand 7	D	264	270	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	53	first strand
Strand 2	E	62	76	anti-parallel
Strand 3	F	62	76	anti-parallel
Strand 4	F	51	53	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	99	103	first strand
Strand 2	E	92	96	anti-parallel
Strand 3	E	81	87	anti-parallel
Strand 4	E	62	76	anti-parallel
Strand 5	F	62	76	anti-parallel
Strand 6	F	81	87	anti-parallel
Strand 7	F	92	96	anti-parallel
Strand 8	F	99	103	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	180	184	first strand
Strand 2	E	150	155	parallel
Strand 3	E	127	131	parallel
Strand 4	E	199	204	parallel
Strand 5	E	229	238	parallel
Strand 6	E	278	285	anti-parallel
Strand 7	E	264	270	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	180	184	first strand
Strand 2	F	150	155	parallel
Strand 3	F	127	131	parallel
Strand 4	F	199	204	parallel
Strand 5	F	229	238	parallel
Strand 6	F	278	285	anti-parallel
Strand 7	F	264	270	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	51	54	first strand
Strand 2	G	62	76	anti-parallel
Strand 3	H	62	76	anti-parallel
Strand 4	H	51	54	anti-parallel
Strand 5	H	46	48	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	99	103	first strand
Strand 2	G	92	96	anti-parallel
Strand 3	G	81	87	anti-parallel
Strand 4	G	62	76	anti-parallel
Strand 5	H	62	76	anti-parallel
Strand 6	H	81	87	anti-parallel
Strand 7	H	92	96	anti-parallel
Strand 8	H	99	103	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	180	183	first strand
Strand 2	G	150	154	parallel
Strand 3	G	127	131	parallel
Strand 4	G	199	204	parallel
Strand 5	G	229	238	parallel
Strand 6	G	278	285	anti-parallel
Strand 7	G	264	270	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	180	183	first strand
Strand 2	H	150	154	parallel
Strand 3	H	127	131	parallel
Strand 4	H	199	204	parallel
Strand 5	H	229	239	parallel
Strand 6	H	278	285	anti-parallel
Strand 7	H	264	270	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O64

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O64