Analysis of interatomic Contacts of Structural Units in PDB entry:
6O6B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O6B entry

There are 4 chains in PDB entry 6O6B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 835
B	MET 1	GLU 835
C	MET 1	GLU 835
D	MET 1	GLU 835

There are124 helices in PDB entry 6O6B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	37	Right-handed alpha
Helix 2	AA2	A	49	59	Right-handed alpha
Helix 3	AA3	A	94	98	Right-handed 310
Helix 4	AA4	A	106	112	Right-handed 310
Helix 5	AA5	A	113	117	Right-handed 310
Helix 6	AA6	A	128	132	Right-handed 310
Helix 7	AA7	A	134	138	Right-handed 310
Helix 8	AA8	A	150	159	Right-handed alpha
Helix 9	AA9	A	164	177	Right-handed alpha
Helix 10	AB1	A	182	204	Right-handed alpha
Helix 11	AB2	A	212	216	Right-handed 310
Helix 12	AB3	A	234	238	Right-handed 310
Helix 13	AB4	A	256	276	Right-handed alpha
Helix 14	AB5	A	292	298	Right-handed alpha
Helix 15	AB6	A	327	331	Right-handed 310
Helix 16	AB7	A	349	372	Right-handed alpha
Helix 17	AB8	A	414	418	Right-handed 310
Helix 18	AB9	A	427	437	Right-handed alpha
Helix 19	AC1	A	470	480	Right-handed alpha
Helix 20	AC2	A	511	515	Right-handed 310
Helix 21	AC3	A	524	533	Right-handed alpha
Helix 22	AC4	A	570	579	Right-handed alpha
Helix 23	AC5	A	585	594	Right-handed alpha
Helix 24	AC6	A	611	619	Right-handed alpha
Helix 25	AC7	A	619	624	Right-handed alpha
Helix 26	AC8	A	627	637	Right-handed alpha
Helix 27	AC9	A	651	670	Right-handed alpha
Helix 28	AD1	A	671	689	Right-handed alpha
Helix 29	AD2	A	730	741	Right-handed alpha
Helix 30	AD3	A	741	747	Right-handed alpha
Helix 31	AD4	A	770	784	Right-handed alpha
Helix 32	AD5	B	27	37	Right-handed alpha
Helix 33	AD6	B	49	59	Right-handed alpha
Helix 34	AD7	B	94	98	Right-handed 310
Helix 35	AD8	B	106	112	Right-handed 310
Helix 36	AD9	B	113	117	Right-handed 310
Helix 37	AE1	B	128	132	Right-handed 310
Helix 38	AE2	B	134	138	Right-handed 310
Helix 39	AE3	B	150	159	Right-handed alpha
Helix 40	AE4	B	164	177	Right-handed alpha
Helix 41	AE5	B	182	204	Right-handed alpha
Helix 42	AE6	B	212	216	Right-handed 310
Helix 43	AE7	B	234	238	Right-handed 310
Helix 44	AE8	B	256	276	Right-handed alpha
Helix 45	AE9	B	292	298	Right-handed alpha
Helix 46	AF1	B	327	331	Right-handed 310
Helix 47	AF2	B	349	372	Right-handed alpha
Helix 48	AF3	B	414	418	Right-handed 310
Helix 49	AF4	B	427	437	Right-handed alpha
Helix 50	AF5	B	470	480	Right-handed alpha
Helix 51	AF6	B	511	515	Right-handed 310
Helix 52	AF7	B	524	533	Right-handed alpha
Helix 53	AF8	B	570	579	Right-handed alpha
Helix 54	AF9	B	585	594	Right-handed alpha
Helix 55	AG1	B	611	619	Right-handed alpha
Helix 56	AG2	B	619	624	Right-handed alpha
Helix 57	AG3	B	627	637	Right-handed alpha
Helix 58	AG4	B	651	670	Right-handed alpha
Helix 59	AG5	B	671	689	Right-handed alpha
Helix 60	AG6	B	730	741	Right-handed alpha
Helix 61	AG7	B	741	747	Right-handed alpha
Helix 62	AG8	B	770	784	Right-handed alpha
Helix 63	AG9	C	27	37	Right-handed alpha
Helix 64	AH1	C	49	59	Right-handed alpha
Helix 65	AH2	C	94	98	Right-handed 310
Helix 66	AH3	C	106	112	Right-handed 310
Helix 67	AH4	C	113	117	Right-handed 310
Helix 68	AH5	C	128	132	Right-handed 310
Helix 69	AH6	C	134	138	Right-handed 310
Helix 70	AH7	C	150	159	Right-handed alpha
Helix 71	AH8	C	164	177	Right-handed alpha
Helix 72	AH9	C	182	204	Right-handed alpha
Helix 73	AI1	C	212	216	Right-handed 310
Helix 74	AI2	C	234	238	Right-handed 310
Helix 75	AI3	C	256	276	Right-handed alpha
Helix 76	AI4	C	292	298	Right-handed alpha
Helix 77	AI5	C	327	331	Right-handed 310
Helix 78	AI6	C	349	372	Right-handed alpha
Helix 79	AI7	C	414	418	Right-handed 310
Helix 80	AI8	C	427	437	Right-handed alpha
Helix 81	AI9	C	470	480	Right-handed alpha
Helix 82	AJ1	C	511	515	Right-handed 310
Helix 83	AJ2	C	524	533	Right-handed alpha
Helix 84	AJ3	C	570	579	Right-handed alpha
Helix 85	AJ4	C	585	594	Right-handed alpha
Helix 86	AJ5	C	611	619	Right-handed alpha
Helix 87	AJ6	C	619	624	Right-handed alpha
Helix 88	AJ7	C	627	637	Right-handed alpha
Helix 89	AJ8	C	651	670	Right-handed alpha
Helix 90	AJ9	C	671	689	Right-handed alpha
Helix 91	AK1	C	730	741	Right-handed alpha
Helix 92	AK2	C	741	747	Right-handed alpha
Helix 93	AK3	C	770	784	Right-handed alpha
Helix 94	AK4	D	27	37	Right-handed alpha
Helix 95	AK5	D	49	59	Right-handed alpha
Helix 96	AK6	D	94	98	Right-handed 310
Helix 97	AK7	D	106	112	Right-handed 310
Helix 98	AK8	D	113	117	Right-handed 310
Helix 99	AK9	D	128	132	Right-handed 310
Helix 100	AL1	D	134	138	Right-handed 310
Helix 101	AL2	D	150	159	Right-handed alpha
Helix 102	AL3	D	164	177	Right-handed alpha
Helix 103	AL4	D	182	203	Right-handed alpha
Helix 104	AL5	D	212	216	Right-handed 310
Helix 105	AL6	D	234	238	Right-handed 310
Helix 106	AL7	D	256	276	Right-handed alpha
Helix 107	AL8	D	292	298	Right-handed alpha
Helix 108	AL9	D	327	331	Right-handed 310
Helix 109	AM1	D	349	372	Right-handed alpha
Helix 110	AM2	D	414	418	Right-handed 310
Helix 111	AM3	D	427	437	Right-handed alpha
Helix 112	AM4	D	470	480	Right-handed alpha
Helix 113	AM5	D	511	515	Right-handed 310
Helix 114	AM6	D	524	533	Right-handed alpha
Helix 115	AM7	D	570	579	Right-handed alpha
Helix 116	AM8	D	585	594	Right-handed alpha
Helix 117	AM9	D	611	619	Right-handed alpha
Helix 118	AN1	D	619	624	Right-handed alpha
Helix 119	AN2	D	627	637	Right-handed alpha
Helix 120	AN3	D	651	670	Right-handed alpha
Helix 121	AN4	D	671	689	Right-handed alpha
Helix 122	AN5	D	730	741	Right-handed alpha
Helix 123	AN6	D	741	747	Right-handed alpha
Helix 124	AN7	D	770	784	Right-handed alpha

There are 40 sheets in PDB entry 6O6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	22	first strand
Strand 2	A	42	45	parallel
Strand 3	A	3	5	parallel
Strand 4	A	63	65	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	146	first strand
Strand 2	A	88	91	parallel
Strand 3	A	80	83	anti-parallel
Strand 4	A	535	536	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	103	first strand
Strand 2	A	124	125	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	228	first strand
Strand 2	A	206	209	parallel
Strand 3	A	458	460	parallel
Strand 4	A	484	490	parallel
Strand 5	A	506	510	parallel
Strand 6	A	499	501	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	228	first strand
Strand 2	A	206	209	parallel
Strand 3	A	458	460	parallel
Strand 4	A	484	490	parallel
Strand 5	A	547	552	anti-parallel
Strand 6	A	520	523	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	250	first strand
Strand 2	A	404	405	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	317	320	first strand
Strand 2	A	304	307	parallel
Strand 3	A	281	285	parallel
Strand 4	A	335	339	parallel
Strand 5	A	378	385	parallel
Strand 6	A	408	413	anti-parallel
Strand 7	A	396	398	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	391	first strand
Strand 2	A	423	425	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	724	first strand
Strand 2	A	699	705	anti-parallel
Strand 3	A	817	824	anti-parallel
Strand 4	A	830	832	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	799	801	first strand
Strand 2	A	762	765	anti-parallel
Strand 3	A	751	759	anti-parallel
Strand 4	A	809	814	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	22	first strand
Strand 2	B	42	45	parallel
Strand 3	B	3	5	parallel
Strand 4	B	63	65	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	146	first strand
Strand 2	B	88	91	parallel
Strand 3	B	80	83	anti-parallel
Strand 4	B	535	536	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	103	first strand
Strand 2	B	124	125	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	225	228	first strand
Strand 2	B	206	209	parallel
Strand 3	B	458	460	parallel
Strand 4	B	484	490	parallel
Strand 5	B	506	510	parallel
Strand 6	B	499	501	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	225	228	first strand
Strand 2	B	206	209	parallel
Strand 3	B	458	460	parallel
Strand 4	B	484	490	parallel
Strand 5	B	547	552	anti-parallel
Strand 6	B	520	523	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	249	250	first strand
Strand 2	B	404	405	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	320	first strand
Strand 2	B	304	307	parallel
Strand 3	B	281	285	parallel
Strand 4	B	335	339	parallel
Strand 5	B	378	385	parallel
Strand 6	B	408	413	anti-parallel
Strand 7	B	396	398	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	391	first strand
Strand 2	B	423	425	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	724	first strand
Strand 2	B	699	705	anti-parallel
Strand 3	B	817	824	anti-parallel
Strand 4	B	830	832	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	799	801	first strand
Strand 2	B	762	765	anti-parallel
Strand 3	B	751	759	anti-parallel
Strand 4	B	809	814	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	22	first strand
Strand 2	C	42	45	parallel
Strand 3	C	3	5	parallel
Strand 4	C	63	65	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	146	first strand
Strand 2	C	88	91	parallel
Strand 3	C	80	83	anti-parallel
Strand 4	C	535	536	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	103	first strand
Strand 2	C	124	125	parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	225	228	first strand
Strand 2	C	206	209	parallel
Strand 3	C	457	460	parallel
Strand 4	C	484	490	parallel
Strand 5	C	506	510	parallel
Strand 6	C	499	501	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	225	228	first strand
Strand 2	C	206	209	parallel
Strand 3	C	457	460	parallel
Strand 4	C	484	490	parallel
Strand 5	C	547	552	anti-parallel
Strand 6	C	520	523	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	249	250	first strand
Strand 2	C	404	405	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	317	320	first strand
Strand 2	C	304	307	parallel
Strand 3	C	281	285	parallel
Strand 4	C	335	339	parallel
Strand 5	C	378	385	parallel
Strand 6	C	408	413	anti-parallel
Strand 7	C	396	398	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	389	391	first strand
Strand 2	C	423	425	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	719	724	first strand
Strand 2	C	699	705	anti-parallel
Strand 3	C	817	824	anti-parallel
Strand 4	C	830	832	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	799	801	first strand
Strand 2	C	762	765	anti-parallel
Strand 3	C	751	759	anti-parallel
Strand 4	C	809	814	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	22	first strand
Strand 2	D	42	45	parallel
Strand 3	D	3	5	parallel
Strand 4	D	63	65	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	146	first strand
Strand 2	D	88	91	parallel
Strand 3	D	80	83	anti-parallel
Strand 4	D	535	536	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	103	first strand
Strand 2	D	124	125	parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	225	228	first strand
Strand 2	D	206	209	parallel
Strand 3	D	457	460	parallel
Strand 4	D	484	490	parallel
Strand 5	D	506	510	parallel
Strand 6	D	499	501	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	225	228	first strand
Strand 2	D	206	209	parallel
Strand 3	D	457	460	parallel
Strand 4	D	484	490	parallel
Strand 5	D	547	552	anti-parallel
Strand 6	D	520	523	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	249	250	first strand
Strand 2	D	404	405	anti-parallel

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There are 7 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	317	320	first strand
Strand 2	D	304	307	parallel
Strand 3	D	281	285	parallel
Strand 4	D	335	339	parallel
Strand 5	D	378	385	parallel
Strand 6	D	408	413	anti-parallel
Strand 7	D	396	398	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	389	391	first strand
Strand 2	D	423	425	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	719	724	first strand
Strand 2	D	699	705	anti-parallel
Strand 3	D	817	824	anti-parallel
Strand 4	D	830	832	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	799	801	first strand
Strand 2	D	762	765	anti-parallel
Strand 3	D	751	759	anti-parallel
Strand 4	D	809	814	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O6B

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O6B