Analysis of interatomic Contacts of Structural Units in PDB entry:
6O6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O6E entry

There are 2 chains in PDB entry 6O6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 2HIS 506
E
 GLY 3ALA 85
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6O6E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
3 15Right-handed alpha
Helix 2
AA2
B
30 48Right-handed alpha
Helix 3
AA3
B
62 75Right-handed alpha
Helix 4
AA4
B
87 99Right-handed alpha
Helix 5
AA5
B
109 116Right-handed alpha
Helix 6
AA6
B
134 138Right-handed 310
Helix 7
AA7
B
175 190Right-handed alpha
Helix 8
AA8
B
206 218Right-handed alpha
Helix 9
AA9
B
226 230Right-handed 310
Helix 10
AB1
B
232 243Right-handed alpha
Helix 11
AB2
B
251 262Right-handed alpha
Helix 12
AB3
B
283 294Right-handed alpha
Helix 13
AB4
B
305 309Right-handed 310
Helix 14
AB5
B
410 419Right-handed alpha
Helix 15
AB6
B
433 437Right-handed 310
Helix 16
AB7
B
452 462Right-handed alpha
Helix 17
AB8
B
465 469Right-handed 310
Helix 18
AB9
B
488 506Right-handed alpha
Helix 19
AC1
E
5 18Right-handed alpha
Helix 20
AC2
E
44 55Right-handed alpha
Helix 21
AC3
E
61 65Right-handed 310
Helix 22
AC4
E
66 71Right-handed alpha
Helix 23
AC5
E
72 83Right-handed alpha
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There are 7 sheets in PDB entry 6O6E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 29first strand
Strand 2
B
19 22anti-parallel
Strand 3
B
221 224parallel
Strand 4
B
196 199parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 81first strand
Strand 2
B
54 57parallel
Strand 3
B
102 105parallel
Strand 4
B
122 125parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 161first strand
Strand 2
B
169 174anti-parallel
Strand 3
B
366 367anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 250first strand
Strand 2
B
274 277parallel
Strand 3
B
298 303parallel
Strand 4
B
312 316anti-parallel
Strand 5
B
331 332anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 341first strand
Strand 2
B
354 359anti-parallel
Strand 3
B
377 385anti-parallel
Strand 4
B
391 396anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
400 403first strand
Strand 2
B
406 409anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
425 431first strand
Strand 2
B
438 444anti-parallel
Strand 3
B
472 475parallel
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