Analysis of interatomic Contacts of Structural Units in PDB entry:
6O6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O6O entry

There are 2 chains in PDB entry 6O6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 35PRO 224
B
 ARG 40LEU 225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6O6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 60Right-handed alpha
Helix 2
AA2
A
61 70Right-handed alpha
Helix 3
AA3
A
72 80Right-handed alpha
Helix 4
AA4
A
82 108Right-handed alpha
Helix 5
AA5
A
111 130Right-handed alpha
Helix 6
AA6
A
130 139Right-handed alpha
Helix 7
AA7
A
145 169Right-handed alpha
Helix 8
AA8
A
174 199Right-handed alpha
Helix 9
AA9
A
204 219Right-handed alpha
Helix 10
AB1
A
220 223Right-handed 310
Helix 11
AB2
B
41 60Right-handed alpha
Helix 12
AB3
B
61 70Right-handed alpha
Helix 13
AB4
B
72 80Right-handed alpha
Helix 14
AB5
B
82 107Right-handed alpha
Helix 15
AB6
B
111 130Right-handed alpha
Helix 16
AB7
B
130 139Right-handed alpha
Helix 17
AB8
B
146 169Right-handed alpha
Helix 18
AB9
B
174 199Right-handed alpha
Helix 19
AC1
B
204 219Right-handed alpha
Helix 20
AC2
B
220 223Right-handed 310
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There are no sheets in PDB entry 6O6O
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il