Analysis of interatomic Contacts of Structural Units in PDB entry:
6O6R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O6R entry

There are 4 chains in PDB entry 6O6R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 104	LYS 1094
B	LYS 104	LYS 1094
C	LYS 104	LYS 1094
D	LYS 104	LYS 1094

There are176 helices in PDB entry 6O6R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	121	126	Right-handed alpha
Helix 2	AA2	A	151	167	Right-handed alpha
Helix 3	AA3	A	178	191	Right-handed alpha
Helix 4	AA4	A	267	277	Right-handed alpha
Helix 5	AA5	A	301	312	Right-handed alpha
Helix 6	AA6	A	326	331	Right-handed alpha
Helix 7	AA7	A	343	348	Right-handed alpha
Helix 8	AA8	A	356	360	Right-handed 310
Helix 9	AA9	A	361	376	Right-handed alpha
Helix 10	AB1	A	378	380	Right-handed 310
Helix 11	AB2	A	395	409	Right-handed alpha
Helix 12	AB3	A	416	427	Right-handed alpha
Helix 13	AB4	A	429	437	Right-handed alpha
Helix 14	AB5	A	450	459	Right-handed alpha
Helix 15	AB6	A	461	471	Right-handed alpha
Helix 16	AB7	A	474	479	Right-handed alpha
Helix 17	AB8	A	493	507	Right-handed alpha
Helix 18	AB9	A	509	521	Right-handed alpha
Helix 19	AC1	A	551	562	Right-handed alpha
Helix 20	AC2	A	567	573	Right-handed alpha
Helix 21	AC3	A	577	593	Right-handed alpha
Helix 22	AC4	A	600	626	Right-handed alpha
Helix 23	AC5	A	627	636	Right-handed alpha
Helix 24	AC6	A	648	653	Right-handed alpha
Helix 25	AC7	A	656	661	Right-handed alpha
Helix 26	AC8	A	662	675	Right-handed alpha
Helix 27	AC9	A	683	692	Right-handed alpha
Helix 28	AD1	A	693	696	Right-handed 310
Helix 29	AD2	A	717	722	Right-handed alpha
Helix 30	AD3	A	724	749	Right-handed alpha
Helix 31	AD4	A	756	775	Right-handed alpha
Helix 32	AD5	A	790	806	Right-handed alpha
Helix 33	AD6	A	811	816	Right-handed alpha
Helix 34	AD7	A	819	842	Right-handed alpha
Helix 35	AD8	A	844	848	Right-handed 310
Helix 36	AD9	A	853	879	Right-handed alpha
Helix 37	AE1	A	888	893	Right-handed alpha
Helix 38	AE2	A	895	900	Right-handed alpha
Helix 39	AE3	A	945	954	Right-handed alpha
Helix 40	AE4	A	955	970	Right-handed alpha
Helix 41	AE5	A	980	997	Right-handed alpha
Helix 42	AE6	A	1002	1006	Right-handed 310
Helix 43	AE7	A	1042	1059	Right-handed alpha
Helix 44	AE8	A	1075	1093	Right-handed alpha
Helix 45	AE9	B	121	126	Right-handed alpha
Helix 46	AF1	B	151	167	Right-handed alpha
Helix 47	AF2	B	178	191	Right-handed alpha
Helix 48	AF3	B	267	277	Right-handed alpha
Helix 49	AF4	B	301	312	Right-handed alpha
Helix 50	AF5	B	326	331	Right-handed alpha
Helix 51	AF6	B	343	348	Right-handed alpha
Helix 52	AF7	B	356	360	Right-handed 310
Helix 53	AF8	B	361	376	Right-handed alpha
Helix 54	AF9	B	378	380	Right-handed 310
Helix 55	AG1	B	395	409	Right-handed alpha
Helix 56	AG2	B	416	427	Right-handed alpha
Helix 57	AG3	B	429	437	Right-handed alpha
Helix 58	AG4	B	450	459	Right-handed alpha
Helix 59	AG5	B	461	471	Right-handed alpha
Helix 60	AG6	B	474	479	Right-handed alpha
Helix 61	AG7	B	493	507	Right-handed alpha
Helix 62	AG8	B	509	521	Right-handed alpha
Helix 63	AG9	B	551	562	Right-handed alpha
Helix 64	AH1	B	567	573	Right-handed alpha
Helix 65	AH2	B	577	593	Right-handed alpha
Helix 66	AH3	B	600	626	Right-handed alpha
Helix 67	AH4	B	627	636	Right-handed alpha
Helix 68	AH5	B	648	653	Right-handed alpha
Helix 69	AH6	B	656	661	Right-handed alpha
Helix 70	AH7	B	662	675	Right-handed alpha
Helix 71	AH8	B	683	692	Right-handed alpha
Helix 72	AH9	B	693	696	Right-handed 310
Helix 73	AI1	B	717	722	Right-handed alpha
Helix 74	AI2	B	724	749	Right-handed alpha
Helix 75	AI3	B	756	775	Right-handed alpha
Helix 76	AI4	B	790	806	Right-handed alpha
Helix 77	AI5	B	811	816	Right-handed alpha
Helix 78	AI6	B	819	842	Right-handed alpha
Helix 79	AI7	B	844	848	Right-handed 310
Helix 80	AI8	B	853	879	Right-handed alpha
Helix 81	AI9	B	888	893	Right-handed alpha
Helix 82	AJ1	B	895	900	Right-handed alpha
Helix 83	AJ2	B	945	954	Right-handed alpha
Helix 84	AJ3	B	955	970	Right-handed alpha
Helix 85	AJ4	B	980	997	Right-handed alpha
Helix 86	AJ5	B	1002	1006	Right-handed 310
Helix 87	AJ6	B	1042	1059	Right-handed alpha
Helix 88	AJ7	B	1075	1093	Right-handed alpha
Helix 89	AJ8	C	121	126	Right-handed alpha
Helix 90	AJ9	C	151	167	Right-handed alpha
Helix 91	AK1	C	178	191	Right-handed alpha
Helix 92	AK2	C	267	277	Right-handed alpha
Helix 93	AK3	C	301	312	Right-handed alpha
Helix 94	AK4	C	326	331	Right-handed alpha
Helix 95	AK5	C	343	348	Right-handed alpha
Helix 96	AK6	C	356	360	Right-handed 310
Helix 97	AK7	C	361	376	Right-handed alpha
Helix 98	AK8	C	378	380	Right-handed 310
Helix 99	AK9	C	395	409	Right-handed alpha
Helix 100	AL1	C	416	427	Right-handed alpha
Helix 101	AL2	C	429	437	Right-handed alpha
Helix 102	AL3	C	450	459	Right-handed alpha
Helix 103	AL4	C	461	471	Right-handed alpha
Helix 104	AL5	C	474	479	Right-handed alpha
Helix 105	AL6	C	493	507	Right-handed alpha
Helix 106	AL7	C	509	521	Right-handed alpha
Helix 107	AL8	C	551	562	Right-handed alpha
Helix 108	AL9	C	567	573	Right-handed alpha
Helix 109	AM1	C	577	593	Right-handed alpha
Helix 110	AM2	C	600	626	Right-handed alpha
Helix 111	AM3	C	627	636	Right-handed alpha
Helix 112	AM4	C	648	653	Right-handed alpha
Helix 113	AM5	C	656	661	Right-handed alpha
Helix 114	AM6	C	662	675	Right-handed alpha
Helix 115	AM7	C	683	692	Right-handed alpha
Helix 116	AM8	C	693	696	Right-handed 310
Helix 117	AM9	C	717	722	Right-handed alpha
Helix 118	AN1	C	724	749	Right-handed alpha
Helix 119	AN2	C	756	775	Right-handed alpha
Helix 120	AN3	C	790	806	Right-handed alpha
Helix 121	AN4	C	811	816	Right-handed alpha
Helix 122	AN5	C	819	842	Right-handed alpha
Helix 123	AN6	C	844	848	Right-handed 310
Helix 124	AN7	C	853	879	Right-handed alpha
Helix 125	AN8	C	888	893	Right-handed alpha
Helix 126	AN9	C	895	900	Right-handed alpha
Helix 127	AO1	C	945	954	Right-handed alpha
Helix 128	AO2	C	955	970	Right-handed alpha
Helix 129	AO3	C	980	997	Right-handed alpha
Helix 130	AO4	C	1002	1006	Right-handed 310
Helix 131	AO5	C	1042	1059	Right-handed alpha
Helix 132	AO6	C	1075	1093	Right-handed alpha
Helix 133	AO7	D	121	126	Right-handed alpha
Helix 134	AO8	D	151	167	Right-handed alpha
Helix 135	AO9	D	178	191	Right-handed alpha
Helix 136	AP1	D	267	277	Right-handed alpha
Helix 137	AP2	D	301	312	Right-handed alpha
Helix 138	AP3	D	326	331	Right-handed alpha
Helix 139	AP4	D	343	348	Right-handed alpha
Helix 140	AP5	D	356	360	Right-handed 310
Helix 141	AP6	D	361	376	Right-handed alpha
Helix 142	AP7	D	378	380	Right-handed 310
Helix 143	AP8	D	395	409	Right-handed alpha
Helix 144	AP9	D	416	427	Right-handed alpha
Helix 145	AQ1	D	429	437	Right-handed alpha
Helix 146	AQ2	D	450	459	Right-handed alpha
Helix 147	AQ3	D	461	471	Right-handed alpha
Helix 148	AQ4	D	474	479	Right-handed alpha
Helix 149	AQ5	D	493	507	Right-handed alpha
Helix 150	AQ6	D	509	521	Right-handed alpha
Helix 151	AQ7	D	551	562	Right-handed alpha
Helix 152	AQ8	D	567	573	Right-handed alpha
Helix 153	AQ9	D	577	593	Right-handed alpha
Helix 154	AR1	D	600	626	Right-handed alpha
Helix 155	AR2	D	627	636	Right-handed alpha
Helix 156	AR3	D	648	653	Right-handed alpha
Helix 157	AR4	D	656	661	Right-handed alpha
Helix 158	AR5	D	662	675	Right-handed alpha
Helix 159	AR6	D	683	692	Right-handed alpha
Helix 160	AR7	D	693	696	Right-handed 310
Helix 161	AR8	D	717	722	Right-handed alpha
Helix 162	AR9	D	724	749	Right-handed alpha
Helix 163	AS1	D	756	775	Right-handed alpha
Helix 164	AS2	D	790	806	Right-handed alpha
Helix 165	AS3	D	811	816	Right-handed alpha
Helix 166	AS4	D	819	842	Right-handed alpha
Helix 167	AS5	D	844	848	Right-handed 310
Helix 168	AS6	D	853	879	Right-handed alpha
Helix 169	AS7	D	888	893	Right-handed alpha
Helix 170	AS8	D	895	900	Right-handed alpha
Helix 171	AS9	D	945	954	Right-handed alpha
Helix 172	AT1	D	955	970	Right-handed alpha
Helix 173	AT2	D	980	997	Right-handed alpha
Helix 174	AT3	D	1002	1006	Right-handed 310
Helix 175	AT4	D	1042	1059	Right-handed alpha
Helix 176	AT5	D	1075	1093	Right-handed alpha

There are 8 sheets in PDB entry 6O6R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	108	first strand
Strand 2	A	250	251	parallel
Strand 3	A	203	204	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	171	first strand
Strand 2	A	134	139	parallel
Strand 3	A	292	296	parallel
Strand 4	A	317	321	parallel
Strand 5	A	382	385	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	108	first strand
Strand 2	B	250	251	parallel
Strand 3	B	203	204	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	171	first strand
Strand 2	B	134	139	parallel
Strand 3	B	292	296	parallel
Strand 4	B	317	321	parallel
Strand 5	B	382	385	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	108	first strand
Strand 2	C	250	251	parallel
Strand 3	C	203	204	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	171	first strand
Strand 2	C	134	139	parallel
Strand 3	C	292	296	parallel
Strand 4	C	317	321	parallel
Strand 5	C	382	385	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	108	first strand
Strand 2	D	250	251	parallel
Strand 3	D	203	204	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	171	first strand
Strand 2	D	134	139	parallel
Strand 3	D	292	296	parallel
Strand 4	D	317	321	parallel
Strand 5	D	382	385	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O6R

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O6R