Analysis of interatomic Contacts of Structural Units in PDB entry:
6O76


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O76 entry

There are 2 chains in PDB entry 6O76 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 54GLY 503
B
 ALA 2THR 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6O76. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 87Right-handed alpha
Helix 2
AA2
A
100 104Right-handed alpha
Helix 3
AA3
A
131 143Right-handed alpha
Helix 4
AA4
A
185 203Right-handed alpha
Helix 5
AA5
A
214 225Right-handed alpha
Helix 6
AA6
A
230 240Right-handed alpha
Helix 7
AA7
A
241 243Right-handed 310
Helix 8
AA8
A
245 258Right-handed alpha
Helix 9
AA9
A
260 272Right-handed alpha
Helix 10
AB1
A
276 286Right-handed alpha
Helix 11
AB2
A
286 292Right-handed alpha
Helix 12
AB3
A
292 313Right-handed alpha
Helix 13
AB4
A
363 368Right-handed alpha
Helix 14
AB5
A
385 401Right-handed alpha
Helix 15
AB6
A
420 434Right-handed alpha
Helix 16
AB7
A
447 459Right-handed alpha
Helix 17
AB8
A
467 474Right-handed alpha
Helix 18
AB9
A
491 502Right-handed alpha
Helix 19
AC1
B
3 24Right-handed alpha
Helix 20
AC2
B
27 45Right-handed alpha
Helix 21
AC3
B
66 87Right-handed alpha
Helix 22
AC4
B
110 114Right-handed 310
Helix 23
AC5
B
131 143Right-handed alpha
Helix 24
AC6
B
185 203Right-handed alpha
Helix 25
AC7
B
214 218Right-handed alpha
Helix 26
AC8
B
233 244Right-handed alpha
Helix 27
AC9
B
245 257Right-handed alpha
Helix 28
AD1
B
265 273Right-handed alpha
Helix 29
AD2
B
276 286Right-handed alpha
Helix 30
AD3
B
286 292Right-handed alpha
Helix 31
AD4
B
292 313Right-handed alpha
Helix 32
AD5
B
364 371Right-handed alpha
Helix 33
AD6
B
385 401Right-handed alpha
Helix 34
AD7
B
420 434Right-handed alpha
Helix 35
AD8
B
447 459Right-handed alpha
Helix 36
AD9
B
467 474Right-handed alpha
Helix 37
AE1
B
491 502Right-handed alpha
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There are 6 sheets in PDB entry 6O76. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 91first strand
Strand 2
A
147 156parallel
Strand 3
A
170 179anti-parallel
Strand 4
A
379 384anti-parallel
Strand 5
A
353 362anti-parallel
Strand 6
A
334 341anti-parallel
Strand 7
A
207 213anti-parallel
Strand 8
A
318 321parallel
Strand 9
A
274 275anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
125 127anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 440first strand
Strand 2
A
411 414parallel
Strand 3
A
462 465parallel
Strand 4
A
475 480anti-parallel
Strand 5
A
486 490anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 91first strand
Strand 2
B
147 156parallel
Strand 3
B
170 179anti-parallel
Strand 4
B
379 384anti-parallel
Strand 5
B
358 362anti-parallel
Strand 6
B
334 340anti-parallel
Strand 7
B
207 213anti-parallel
Strand 8
B
318 321parallel
Strand 9
B
274 275anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 99first strand
Strand 2
B
125 127anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
438 439first strand
Strand 2
B
411 414parallel
Strand 3
B
462 465parallel
Strand 4
B
475 480anti-parallel
Strand 5
B
486 490anti-parallel
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