Analysis of interatomic Contacts of Structural Units in PDB entry:
6O77

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O77 entry

There are 4 chains in PDB entry 6O77 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 95	LYS 1094
B	GLY 95	LYS 1094
C	GLY 95	LYS 1094
D	GLY 95	LYS 1094

There are176 helices in PDB entry 6O77. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	119	127	Right-handed alpha
Helix 2	AA2	A	149	167	Right-handed alpha
Helix 3	AA3	A	178	193	Right-handed alpha
Helix 4	AA4	A	267	279	Right-handed alpha
Helix 5	AA5	A	300	313	Right-handed alpha
Helix 6	AA6	A	325	334	Right-handed alpha
Helix 7	AA7	A	342	348	Right-handed alpha
Helix 8	AA8	A	361	376	Right-handed alpha
Helix 9	AA9	A	378	380	Right-handed 310
Helix 10	AB1	A	395	406	Right-handed alpha
Helix 11	AB2	A	416	427	Right-handed alpha
Helix 12	AB3	A	429	438	Right-handed alpha
Helix 13	AB4	A	450	459	Right-handed alpha
Helix 14	AB5	A	461	471	Right-handed alpha
Helix 15	AB6	A	474	479	Right-handed alpha
Helix 16	AB7	A	480	489	Right-handed alpha
Helix 17	AB8	A	493	503	Right-handed alpha
Helix 18	AB9	A	511	524	Right-handed alpha
Helix 19	AC1	A	550	562	Right-handed alpha
Helix 20	AC2	A	564	573	Right-handed alpha
Helix 21	AC3	A	577	595	Right-handed alpha
Helix 22	AC4	A	599	626	Right-handed alpha
Helix 23	AC5	A	627	635	Right-handed alpha
Helix 24	AC6	A	646	654	Right-handed alpha
Helix 25	AC7	A	656	661	Right-handed alpha
Helix 26	AC8	A	662	675	Right-handed alpha
Helix 27	AC9	A	682	689	Right-handed alpha
Helix 28	AD1	A	719	723	Right-handed 310
Helix 29	AD2	A	724	749	Right-handed alpha
Helix 30	AD3	A	756	776	Right-handed alpha
Helix 31	AD4	A	782	787	Right-handed alpha
Helix 32	AD5	A	788	808	Right-handed alpha
Helix 33	AD6	A	811	831	Right-handed alpha
Helix 34	AD7	A	831	837	Right-handed alpha
Helix 35	AD8	A	842	851	Right-handed alpha
Helix 36	AD9	A	853	875	Right-handed alpha
Helix 37	AE1	A	883	887	Right-handed 310
Helix 38	AE2	A	894	900	Right-handed alpha
Helix 39	AE3	A	945	959	Right-handed alpha
Helix 40	AE4	A	961	976	Right-handed alpha
Helix 41	AE5	A	976	994	Right-handed alpha
Helix 42	AE6	A	1004	1008	Right-handed alpha
Helix 43	AE7	A	1041	1061	Right-handed alpha
Helix 44	AE8	A	1068	1094	Right-handed alpha
Helix 45	AE9	B	119	127	Right-handed alpha
Helix 46	AF1	B	149	167	Right-handed alpha
Helix 47	AF2	B	178	193	Right-handed alpha
Helix 48	AF3	B	267	279	Right-handed alpha
Helix 49	AF4	B	300	313	Right-handed alpha
Helix 50	AF5	B	325	334	Right-handed alpha
Helix 51	AF6	B	342	348	Right-handed alpha
Helix 52	AF7	B	361	376	Right-handed alpha
Helix 53	AF8	B	378	380	Right-handed 310
Helix 54	AF9	B	395	406	Right-handed alpha
Helix 55	AG1	B	416	427	Right-handed alpha
Helix 56	AG2	B	429	438	Right-handed alpha
Helix 57	AG3	B	450	459	Right-handed alpha
Helix 58	AG4	B	461	471	Right-handed alpha
Helix 59	AG5	B	474	479	Right-handed alpha
Helix 60	AG6	B	480	489	Right-handed alpha
Helix 61	AG7	B	493	503	Right-handed alpha
Helix 62	AG8	B	511	524	Right-handed alpha
Helix 63	AG9	B	550	562	Right-handed alpha
Helix 64	AH1	B	564	573	Right-handed alpha
Helix 65	AH2	B	577	595	Right-handed alpha
Helix 66	AH3	B	599	626	Right-handed alpha
Helix 67	AH4	B	627	635	Right-handed alpha
Helix 68	AH5	B	646	654	Right-handed alpha
Helix 69	AH6	B	656	661	Right-handed alpha
Helix 70	AH7	B	662	675	Right-handed alpha
Helix 71	AH8	B	682	689	Right-handed alpha
Helix 72	AH9	B	719	723	Right-handed 310
Helix 73	AI1	B	724	749	Right-handed alpha
Helix 74	AI2	B	756	776	Right-handed alpha
Helix 75	AI3	B	782	787	Right-handed alpha
Helix 76	AI4	B	788	808	Right-handed alpha
Helix 77	AI5	B	811	831	Right-handed alpha
Helix 78	AI6	B	831	837	Right-handed alpha
Helix 79	AI7	B	842	851	Right-handed alpha
Helix 80	AI8	B	853	875	Right-handed alpha
Helix 81	AI9	B	883	887	Right-handed 310
Helix 82	AJ1	B	894	900	Right-handed alpha
Helix 83	AJ2	B	945	959	Right-handed alpha
Helix 84	AJ3	B	961	976	Right-handed alpha
Helix 85	AJ4	B	976	994	Right-handed alpha
Helix 86	AJ5	B	1004	1008	Right-handed alpha
Helix 87	AJ6	B	1041	1061	Right-handed alpha
Helix 88	AJ7	B	1068	1094	Right-handed alpha
Helix 89	AJ8	C	119	127	Right-handed alpha
Helix 90	AJ9	C	149	167	Right-handed alpha
Helix 91	AK1	C	178	193	Right-handed alpha
Helix 92	AK2	C	267	279	Right-handed alpha
Helix 93	AK3	C	300	313	Right-handed alpha
Helix 94	AK4	C	325	334	Right-handed alpha
Helix 95	AK5	C	342	348	Right-handed alpha
Helix 96	AK6	C	361	376	Right-handed alpha
Helix 97	AK7	C	378	380	Right-handed 310
Helix 98	AK8	C	395	406	Right-handed alpha
Helix 99	AK9	C	416	427	Right-handed alpha
Helix 100	AL1	C	429	438	Right-handed alpha
Helix 101	AL2	C	450	459	Right-handed alpha
Helix 102	AL3	C	461	471	Right-handed alpha
Helix 103	AL4	C	474	479	Right-handed alpha
Helix 104	AL5	C	480	489	Right-handed alpha
Helix 105	AL6	C	493	503	Right-handed alpha
Helix 106	AL7	C	511	524	Right-handed alpha
Helix 107	AL8	C	550	562	Right-handed alpha
Helix 108	AL9	C	564	573	Right-handed alpha
Helix 109	AM1	C	577	595	Right-handed alpha
Helix 110	AM2	C	599	626	Right-handed alpha
Helix 111	AM3	C	627	635	Right-handed alpha
Helix 112	AM4	C	646	654	Right-handed alpha
Helix 113	AM5	C	656	661	Right-handed alpha
Helix 114	AM6	C	662	675	Right-handed alpha
Helix 115	AM7	C	682	689	Right-handed alpha
Helix 116	AM8	C	719	723	Right-handed 310
Helix 117	AM9	C	724	749	Right-handed alpha
Helix 118	AN1	C	756	776	Right-handed alpha
Helix 119	AN2	C	782	787	Right-handed alpha
Helix 120	AN3	C	788	808	Right-handed alpha
Helix 121	AN4	C	811	831	Right-handed alpha
Helix 122	AN5	C	831	837	Right-handed alpha
Helix 123	AN6	C	842	851	Right-handed alpha
Helix 124	AN7	C	853	875	Right-handed alpha
Helix 125	AN8	C	883	887	Right-handed 310
Helix 126	AN9	C	894	900	Right-handed alpha
Helix 127	AO1	C	945	959	Right-handed alpha
Helix 128	AO2	C	961	976	Right-handed alpha
Helix 129	AO3	C	976	994	Right-handed alpha
Helix 130	AO4	C	1004	1008	Right-handed alpha
Helix 131	AO5	C	1041	1061	Right-handed alpha
Helix 132	AO6	C	1068	1094	Right-handed alpha
Helix 133	AO7	D	119	127	Right-handed alpha
Helix 134	AO8	D	149	167	Right-handed alpha
Helix 135	AO9	D	178	193	Right-handed alpha
Helix 136	AP1	D	267	279	Right-handed alpha
Helix 137	AP2	D	300	313	Right-handed alpha
Helix 138	AP3	D	325	334	Right-handed alpha
Helix 139	AP4	D	342	348	Right-handed alpha
Helix 140	AP5	D	361	376	Right-handed alpha
Helix 141	AP6	D	378	380	Right-handed 310
Helix 142	AP7	D	395	406	Right-handed alpha
Helix 143	AP8	D	416	427	Right-handed alpha
Helix 144	AP9	D	429	438	Right-handed alpha
Helix 145	AQ1	D	450	459	Right-handed alpha
Helix 146	AQ2	D	461	471	Right-handed alpha
Helix 147	AQ3	D	474	479	Right-handed alpha
Helix 148	AQ4	D	480	489	Right-handed alpha
Helix 149	AQ5	D	493	503	Right-handed alpha
Helix 150	AQ6	D	511	524	Right-handed alpha
Helix 151	AQ7	D	550	562	Right-handed alpha
Helix 152	AQ8	D	564	573	Right-handed alpha
Helix 153	AQ9	D	577	595	Right-handed alpha
Helix 154	AR1	D	599	626	Right-handed alpha
Helix 155	AR2	D	627	635	Right-handed alpha
Helix 156	AR3	D	646	654	Right-handed alpha
Helix 157	AR4	D	656	661	Right-handed alpha
Helix 158	AR5	D	662	675	Right-handed alpha
Helix 159	AR6	D	682	689	Right-handed alpha
Helix 160	AR7	D	719	723	Right-handed 310
Helix 161	AR8	D	724	749	Right-handed alpha
Helix 162	AR9	D	756	776	Right-handed alpha
Helix 163	AS1	D	782	787	Right-handed alpha
Helix 164	AS2	D	788	808	Right-handed alpha
Helix 165	AS3	D	811	831	Right-handed alpha
Helix 166	AS4	D	831	837	Right-handed alpha
Helix 167	AS5	D	842	851	Right-handed alpha
Helix 168	AS6	D	853	875	Right-handed alpha
Helix 169	AS7	D	883	887	Right-handed 310
Helix 170	AS8	D	894	900	Right-handed alpha
Helix 171	AS9	D	945	959	Right-handed alpha
Helix 172	AT1	D	961	976	Right-handed alpha
Helix 173	AT2	D	976	994	Right-handed alpha
Helix 174	AT3	D	1004	1008	Right-handed alpha
Helix 175	AT4	D	1041	1061	Right-handed alpha
Helix 176	AT5	D	1068	1094	Right-handed alpha

There are 8 sheets in PDB entry 6O77. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	98	first strand
Strand 2	A	225	226	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	110	first strand
Strand 2	A	250	253	parallel
Strand 3	A	201	206	parallel
Strand 4	A	169	172	parallel
Strand 5	A	135	139	parallel
Strand 6	A	292	296	parallel
Strand 7	A	318	321	parallel
Strand 8	A	382	385	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	B	225	226	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	110	first strand
Strand 2	B	250	253	parallel
Strand 3	B	201	206	parallel
Strand 4	B	169	172	parallel
Strand 5	B	135	139	parallel
Strand 6	B	292	296	parallel
Strand 7	B	318	321	parallel
Strand 8	B	382	385	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	98	first strand
Strand 2	C	225	226	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	110	first strand
Strand 2	C	250	253	parallel
Strand 3	C	201	206	parallel
Strand 4	C	169	172	parallel
Strand 5	C	135	139	parallel
Strand 6	C	292	296	parallel
Strand 7	C	318	321	parallel
Strand 8	C	382	385	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	98	first strand
Strand 2	D	225	226	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	110	first strand
Strand 2	D	250	253	parallel
Strand 3	D	201	206	parallel
Strand 4	D	169	172	parallel
Strand 5	D	135	139	parallel
Strand 6	D	292	296	parallel
Strand 7	D	318	321	parallel
Strand 8	D	382	385	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O77

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O77