Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7A

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O7A entry

There are 3 chains in PDB entry 6O7A (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 320	LYS 852
C	GLN 320	LYS 852
B	GLN 320	TRP 588

There are 85 helices in PDB entry 6O7A. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	331	345	Right-handed alpha
Helix 2	AA2	A	358	368	Right-handed alpha
Helix 3	AA3	A	387	394	Right-handed alpha
Helix 4	AA4	A	410	427	Right-handed alpha
Helix 5	AA5	A	442	454	Right-handed alpha
Helix 6	AA6	A	462	476	Right-handed alpha
Helix 7	AA7	A	479	488	Right-handed alpha
Helix 8	AA8	A	500	503	Right-handed 310
Helix 9	AA9	A	506	511	Right-handed alpha
Helix 10	AB1	A	591	599	Right-handed alpha
Helix 11	AB2	A	600	602	Right-handed 310
Helix 12	AB3	A	616	627	Right-handed alpha
Helix 13	AB4	A	648	654	Right-handed alpha
Helix 14	AB5	A	656	660	Right-handed 310
Helix 15	AB6	A	674	697	Right-handed alpha
Helix 16	AB7	A	735	741	Right-handed alpha
Helix 17	AB8	A	754	767	Right-handed alpha
Helix 18	AB9	A	768	779	Right-handed alpha
Helix 19	AC1	A	801	810	Right-handed alpha
Helix 20	AC2	A	811	813	Right-handed 310
Helix 21	AC3	C	331	345	Right-handed alpha
Helix 22	AC4	C	358	368	Right-handed alpha
Helix 23	AC5	C	387	394	Right-handed alpha
Helix 24	AC6	C	410	427	Right-handed alpha
Helix 25	AC7	C	442	454	Right-handed alpha
Helix 26	AC8	C	455	457	Right-handed 310
Helix 27	AC9	C	462	476	Right-handed alpha
Helix 28	AD1	C	478	488	Right-handed alpha
Helix 29	AD2	C	506	512	Right-handed alpha
Helix 30	AD3	C	525	528	Right-handed 310
Helix 31	AD4	C	591	603	Right-handed alpha
Helix 32	AD5	C	616	626	Right-handed alpha
Helix 33	AD6	C	630	634	Right-handed 310
Helix 34	AD7	C	648	654	Right-handed alpha
Helix 35	AD8	C	655	660	Right-handed 310
Helix 36	AD9	C	668	672	Right-handed 310
Helix 37	AE1	C	674	697	Right-handed alpha
Helix 38	AE2	C	736	741	Right-handed alpha
Helix 39	AE3	C	744	748	Right-handed 310
Helix 40	AE4	C	754	767	Right-handed alpha
Helix 41	AE5	C	769	779	Right-handed alpha
Helix 42	AE6	C	802	810	Right-handed alpha
Helix 43	AE7	C	811	813	Right-handed 310
Helix 44	AE8	B	331	344	Right-handed alpha
Helix 45	AE9	B	358	368	Right-handed alpha
Helix 46	AF1	B	387	394	Right-handed alpha
Helix 47	AF2	B	410	427	Right-handed alpha
Helix 48	AF3	B	445	454	Right-handed alpha
Helix 49	AF4	B	462	474	Right-handed alpha
Helix 50	AF5	B	478	488	Right-handed alpha
Helix 51	AF6	B	499	503	Right-handed 310
Helix 52	AF7	B	506	513	Right-handed alpha
Helix 53	AF8	B	525	528	Right-handed 310
Helix 54	AF9	B	591	603	Right-handed alpha
Helix 55	AG1	B	616	626	Right-handed alpha
Helix 56	AG2	B	648	654	Right-handed alpha
Helix 57	AG3	B	656	660	Right-handed 310
Helix 58	AG4	B	668	672	Right-handed 310
Helix 59	AG5	B	674	696	Right-handed alpha
Helix 60	AG6	B	735	742	Right-handed alpha
Helix 61	AG7	B	754	767	Right-handed alpha
Helix 62	AG8	B	768	779	Right-handed alpha
Helix 63	AG9	B	791	793	Right-handed 310
Helix 64	AH1	B	801	811	Right-handed alpha
Helix 65	AH2	D	331	346	Right-handed alpha
Helix 66	AH3	D	358	368	Right-handed alpha
Helix 67	AH4	D	387	394	Right-handed alpha
Helix 68	AH5	D	410	427	Right-handed alpha
Helix 69	AH6	D	445	454	Right-handed alpha
Helix 70	AH7	D	462	476	Right-handed alpha
Helix 71	AH8	D	478	488	Right-handed alpha
Helix 72	AH9	D	506	511	Right-handed alpha
Helix 73	AI1	D	525	528	Right-handed 310
Helix 74	AI2	D	591	603	Right-handed alpha
Helix 75	AI3	D	616	626	Right-handed alpha
Helix 76	AI4	D	630	634	Right-handed 310
Helix 77	AI5	D	648	654	Right-handed alpha
Helix 78	AI6	D	655	660	Right-handed 310
Helix 79	AI7	D	668	672	Right-handed 310
Helix 80	AI8	D	674	696	Right-handed alpha
Helix 81	AI9	D	735	740	Right-handed alpha
Helix 82	AJ1	D	754	767	Right-handed alpha
Helix 83	AJ2	D	769	779	Right-handed alpha
Helix 84	AJ3	D	791	793	Right-handed 310
Helix 85	AJ4	D	802	811	Right-handed alpha

There are 19 sheets in PDB entry 6O7A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	382	first strand
Strand 2	A	349	355	parallel
Strand 3	A	323	326	parallel
Strand 4	A	401	404	parallel
Strand 5	A	435	440	parallel
Strand 6	A	457	461	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	493	498	first strand
Strand 2	A	546	551	anti-parallel
Strand 3	A	518	524	anti-parallel
Strand 4	A	530	533	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	640	642	first strand
Strand 2	A	609	612	parallel
Strand 3	A	583	585	parallel
Strand 4	A	662	665	parallel
Strand 5	A	729	731	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	783	787	first strand
Strand 2	A	846	851	anti-parallel
Strand 3	A	815	819	anti-parallel
Strand 4	A	828	829	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	382	first strand
Strand 2	C	349	355	parallel
Strand 3	C	323	326	parallel
Strand 4	C	401	404	parallel
Strand 5	C	435	440	parallel
Strand 6	C	458	461	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	493	497	first strand
Strand 2	C	546	551	anti-parallel
Strand 3	C	517	523	anti-parallel
Strand 4	C	531	533	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	637	643	first strand
Strand 2	C	607	613	parallel
Strand 3	C	582	586	parallel
Strand 4	C	662	665	parallel
Strand 5	C	728	731	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	783	789	first strand
Strand 2	C	845	851	anti-parallel
Strand 3	C	815	820	anti-parallel
Strand 4	C	828	829	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	798	801	first strand
Strand 2	C	837	840	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	382	first strand
Strand 2	B	349	355	parallel
Strand 3	B	323	326	parallel
Strand 4	B	401	404	parallel
Strand 5	B	435	440	parallel
Strand 6	B	457	461	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	493	497	first strand
Strand 2	B	546	551	anti-parallel
Strand 3	B	517	523	anti-parallel
Strand 4	B	531	533	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	637	643	first strand
Strand 2	B	607	613	parallel
Strand 3	B	582	586	parallel
Strand 4	B	662	665	parallel
Strand 5	B	728	733	parallel
Strand 6	B	750	753	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	783	789	first strand
Strand 2	B	845	851	anti-parallel
Strand 3	B	814	820	anti-parallel
Strand 4	B	828	829	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	798	800	first strand
Strand 2	B	838	840	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	382	first strand
Strand 2	D	349	355	parallel
Strand 3	D	323	326	parallel
Strand 4	D	401	404	parallel
Strand 5	D	435	440	parallel
Strand 6	D	457	461	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	493	497	first strand
Strand 2	D	546	551	anti-parallel
Strand 3	D	518	523	anti-parallel
Strand 4	D	531	532	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	637	643	first strand
Strand 2	D	607	613	parallel
Strand 3	D	582	586	parallel
Strand 4	D	662	665	parallel
Strand 5	D	728	733	parallel
Strand 6	D	752	753	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	783	789	first strand
Strand 2	D	845	851	anti-parallel
Strand 3	D	815	820	anti-parallel
Strand 4	D	828	829	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	799	801	first strand
Strand 2	D	837	839	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O7A

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7A