Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O7C entry

There is 1 chain in PDB entry 6O7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 320GLU 853
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6O7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
331 344Right-handed alpha
Helix 2
AA2
A
345 347Right-handed 310
Helix 3
AA3
A
358 368Right-handed alpha
Helix 4
AA4
A
387 394Right-handed alpha
Helix 5
AA5
A
395 399Right-handed 310
Helix 6
AA6
A
410 427Right-handed alpha
Helix 7
AA7
A
442 444Right-handed 310
Helix 8
AA8
A
445 454Right-handed alpha
Helix 9
AA9
A
462 476Right-handed alpha
Helix 10
AB1
A
478 487Right-handed alpha
Helix 11
AB2
A
499 503Right-handed 310
Helix 12
AB3
A
506 511Right-handed alpha
Helix 13
AB4
A
525 528Right-handed 310
Helix 14
AB5
A
591 601Right-handed alpha
Helix 15
AB6
A
616 627Right-handed alpha
Helix 16
AB7
A
630 634Right-handed 310
Helix 17
AB8
A
648 653Right-handed alpha
Helix 18
AB9
A
654 655Right-handed 310
Helix 19
AC1
A
656 660Right-handed 310
Helix 20
AC2
A
674 696Right-handed alpha
Helix 21
AC3
A
735 742Right-handed alpha
Helix 22
AC4
A
745 749Right-handed 310
Helix 23
AC5
A
754 767Right-handed alpha
Helix 24
AC6
A
769 779Right-handed alpha
Helix 25
AC7
A
791 793Right-handed 310
Helix 26
AC8
A
802 811Right-handed alpha
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There are 5 sheets in PDB entry 6O7C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 382first strand
Strand 2
A
350 355parallel
Strand 3
A
323 326parallel
Strand 4
A
401 404parallel
Strand 5
A
435 440parallel
Strand 6
A
457 461parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
493 497first strand
Strand 2
A
546 551anti-parallel
Strand 3
A
517 523anti-parallel
Strand 4
A
531 533anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
637 643first strand
Strand 2
A
607 613parallel
Strand 3
A
582 586parallel
Strand 4
A
662 665parallel
Strand 5
A
728 733parallel
Strand 6
A
751 753parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
783 789first strand
Strand 2
A
845 851anti-parallel
Strand 3
A
814 820anti-parallel
Strand 4
A
828 829anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 801first strand
Strand 2
A
837 839anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il