Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O7F entry

There is 1 chain in PDB entry 6O7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6O7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 29Right-handed alpha
Helix 2
AA2
A
40 44Right-handed 310
Helix 3
AA3
A
46 53Right-handed alpha
Helix 4
AA4
A
60 68Right-handed alpha
Helix 5
AA5
A
78 85Right-handed 310
Helix 6
AA6
A
96 99Right-handed 310
Helix 7
AA7
A
100 111Right-handed alpha
Helix 8
AA8
A
118 120Right-handed 310
Helix 9
AA9
A
130 149Right-handed alpha
Helix 10
AB1
A
150 154Right-handed 310
Helix 11
AB2
A
177 190Right-handed alpha
Helix 12
AB3
A
200 211Right-handed alpha
Helix 13
AB4
A
221 232Right-handed alpha
Helix 14
AB5
A
251 257Right-handed alpha
Helix 15
AB6
A
268 272Right-handed 310
Helix 16
AB7
A
300 304Right-handed 310
Helix 17
AB8
A
305 336Right-handed alpha
Helix 18
AB9
A
336 341Right-handed alpha
Helix 19
AC1
A
352 360Right-handed alpha
Helix 20
AC2
A
365 371Right-handed alpha
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There are 2 sheets in PDB entry 6O7F. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
33 36parallel
Strand 3
A
3 5parallel
Strand 4
A
70 72parallel
Strand 5
A
90 93parallel
Strand 6
A
113 116parallel
Strand 7
A
343 346anti-parallel
Strand 8
A
349 350anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
A
193 198parallel
Strand 3
A
170 174parallel
Strand 4
A
234 237parallel
Strand 5
A
263 266parallel
Strand 6
A
293 296parallel
Strand 7
A
287 290anti-parallel
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