Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O7H entry

There are 9 chains in PDB entry 6O7H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 2	ARG 777
B	VAL 23	GLY 185
C	ARG 4	LEU 287
D	MET 1	LEU 287
E	PRO 2	GLY 287
G	G -8	C 18
H	G 17	C 35
F	MET 1	GLU 397
K	A 1	A 4

There are 81 helices in PDB entry 6O7H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	13	Right-handed alpha
Helix 2	AA2	A	17	22	Right-handed alpha
Helix 3	AA3	A	29	42	Right-handed alpha
Helix 4	AA4	A	48	53	Right-handed alpha
Helix 5	AA5	A	69	78	Right-handed alpha
Helix 6	AA6	A	79	84	Right-handed alpha
Helix 7	AA7	A	86	105	Right-handed alpha
Helix 8	AA8	A	150	167	Right-handed alpha
Helix 9	AA9	A	171	184	Right-handed alpha
Helix 10	AB1	A	197	216	Right-handed alpha
Helix 11	AB2	A	218	224	Right-handed alpha
Helix 12	AB3	A	243	248	Right-handed alpha
Helix 13	AB4	A	255	282	Right-handed alpha
Helix 14	AB5	A	284	286	Right-handed 310
Helix 15	AB6	A	303	325	Right-handed alpha
Helix 16	AB7	A	340	343	Right-handed 310
Helix 17	AB8	A	351	369	Right-handed alpha
Helix 18	AB9	A	413	424	Right-handed alpha
Helix 19	AC1	A	501	508	Right-handed alpha
Helix 20	AC2	A	524	529	Right-handed alpha
Helix 21	AC3	A	530	532	Right-handed 310
Helix 22	AC4	A	534	551	Right-handed alpha
Helix 23	AC5	A	552	558	Right-handed alpha
Helix 24	AC6	A	561	566	Right-handed alpha
Helix 25	AC7	A	596	614	Right-handed alpha
Helix 26	AC8	A	632	651	Right-handed alpha
Helix 27	AC9	A	674	685	Right-handed alpha
Helix 28	AD1	A	702	719	Right-handed alpha
Helix 29	AD2	A	723	736	Right-handed alpha
Helix 30	AD3	A	749	755	Right-handed alpha
Helix 31	AD4	A	764	775	Right-handed alpha
Helix 32	AD5	B	24	28	Right-handed alpha
Helix 33	AD6	B	37	42	Right-handed alpha
Helix 34	AD7	B	48	62	Right-handed alpha
Helix 35	AD8	B	72	86	Right-handed alpha
Helix 36	AD9	B	99	108	Right-handed alpha
Helix 37	AE1	B	117	132	Right-handed alpha
Helix 38	AE2	B	138	156	Right-handed alpha
Helix 39	AE3	B	165	182	Right-handed alpha
Helix 40	AE4	C	51	70	Right-handed alpha
Helix 41	AE5	C	115	120	Right-handed alpha
Helix 42	AE6	C	123	129	Right-handed alpha
Helix 43	AE7	C	149	158	Right-handed alpha
Helix 44	AE8	C	206	223	Right-handed alpha
Helix 45	AE9	C	247	254	Right-handed alpha
Helix 46	AF1	C	267	274	Right-handed alpha
Helix 47	AF2	C	282	287	Right-handed alpha
Helix 48	AF3	D	51	70	Right-handed alpha
Helix 49	AF4	D	115	120	Right-handed alpha
Helix 50	AF5	D	124	129	Right-handed alpha
Helix 51	AF6	D	151	159	Right-handed alpha
Helix 52	AF7	D	206	221	Right-handed alpha
Helix 53	AF8	D	247	254	Right-handed alpha
Helix 54	AF9	D	267	272	Right-handed alpha
Helix 55	AG1	D	275	280	Right-handed alpha
Helix 56	AG2	D	280	285	Right-handed alpha
Helix 57	AG3	E	20	36	Right-handed alpha
Helix 58	AG4	E	37	50	Right-handed alpha
Helix 59	AG5	E	76	81	Right-handed alpha
Helix 60	AG6	E	88	99	Right-handed alpha
Helix 61	AG7	E	103	111	Right-handed alpha
Helix 62	AG8	E	164	169	Right-handed alpha
Helix 63	AG9	E	171	182	Right-handed alpha
Helix 64	AH1	E	187	191	Right-handed 310
Helix 65	AH2	F	43	47	Right-handed 310
Helix 66	AH3	F	52	60	Right-handed alpha
Helix 67	AH4	F	113	132	Right-handed alpha
Helix 68	AH5	F	137	142	Right-handed alpha
Helix 69	AH6	F	151	155	Right-handed alpha
Helix 70	AH7	F	160	169	Right-handed alpha
Helix 71	AH8	F	179	187	Right-handed alpha
Helix 72	AH9	F	204	207	Right-handed 310
Helix 73	AI1	F	218	220	Right-handed 310
Helix 74	AI2	F	256	263	Right-handed alpha
Helix 75	AI3	F	271	276	Right-handed alpha
Helix 76	AI4	F	284	297	Right-handed alpha
Helix 77	AI5	F	302	306	Right-handed 310
Helix 78	AI6	F	317	323	Right-handed alpha
Helix 79	AI7	F	340	344	Right-handed 310
Helix 80	AI8	F	345	349	Right-handed 310
Helix 81	AI9	F	354	365	Right-handed alpha

There are 29 sheets in PDB entry 6O7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	120	first strand
Strand 2	A	128	129	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	291	first strand
Strand 2	A	295	301	anti-parallel
Strand 3	A	233	241	anti-parallel
Strand 4	A	330	338	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	345	346	first strand
Strand 2	A	349	350	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	386	388	first strand
Strand 2	A	395	397	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	403	first strand
Strand 2	A	411	412	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	444	445	first strand
Strand 2	A	450	455	anti-parallel
Strand 3	A	429	435	anti-parallel
Strand 4	A	464	468	anti-parallel
Strand 5	A	481	485	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	580	586	first strand
Strand 2	A	589	595	anti-parallel
Strand 3	A	515	522	anti-parallel
Strand 4	A	620	627	anti-parallel
Strand 5	A	654	656	parallel
Strand 6	A	672	673	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	689	691	first strand
Strand 2	A	694	695	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	143	first strand
Strand 2	C	191	200	anti-parallel
Strand 3	C	147	148	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	143	first strand
Strand 2	C	191	200	anti-parallel
Strand 3	C	7	17	anti-parallel
Strand 4	C	236	244	anti-parallel
Strand 5	C	260	262	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	88	first strand
Strand 2	C	99	101	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	104	first strand
Strand 2	C	109	110	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	163	168	first strand
Strand 2	C	181	186	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	143	first strand
Strand 2	D	191	200	anti-parallel
Strand 3	D	147	148	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	143	first strand
Strand 2	D	191	200	anti-parallel
Strand 3	D	7	17	anti-parallel
Strand 4	D	236	244	anti-parallel
Strand 5	D	260	261	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	88	first strand
Strand 2	D	99	101	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	104	first strand
Strand 2	D	109	110	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	169	first strand
Strand 2	D	180	186	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	231	232	first strand
Strand 2	F	209	212	parallel
Strand 3	F	253	255	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	61	first strand
Strand 2	E	155	161	anti-parallel
Strand 3	E	3	11	anti-parallel
Strand 4	E	195	203	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	67	68	first strand
Strand 2	E	101	102	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	124	134	first strand
Strand 2	E	141	151	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	252	254	first strand
Strand 2	E	211	214	anti-parallel
Strand 3	E	279	282	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	229	232	first strand
Strand 2	E	244	247	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	235	236	first strand
Strand 2	E	239	240	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	261	263	first strand
Strand 2	E	271	273	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	248	251	first strand
Strand 2	F	4	8	anti-parallel
Strand 3	F	393	396	anti-parallel
Strand 4	F	331	334	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	15	20	first strand
Strand 2	F	100	103	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	236	243	first strand
Strand 2	F	222	230	anti-parallel
Strand 3	F	383	386	anti-parallel
Strand 4	F	389	390	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O7H

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7H