Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O7I entry

There are 11 chains in PDB entry 6O7I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 2	ARG 777
B	LYS 38	GLY 185
C	ARG 4	LEU 287
D	MET 1	LEU 287
E	PRO 2	GLY 287
J	TRP 49	GLY 183
G	G 1	G 26
H	C 18	G 36
K	MET 1	LEU 287
I	A 1	A 4
F	MET 1	GLU 397

There are 91 helices in PDB entry 6O7I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	11	Right-handed alpha
Helix 2	AA2	A	18	23	Right-handed alpha
Helix 3	AA3	A	31	44	Right-handed alpha
Helix 4	AA4	A	48	53	Right-handed alpha
Helix 5	AA5	A	54	59	Right-handed alpha
Helix 6	AA6	A	69	78	Right-handed alpha
Helix 7	AA7	A	86	106	Right-handed alpha
Helix 8	AA8	A	152	168	Right-handed alpha
Helix 9	AA9	A	175	183	Right-handed alpha
Helix 10	AB1	A	197	216	Right-handed alpha
Helix 11	AB2	A	218	224	Right-handed alpha
Helix 12	AB3	A	243	248	Right-handed alpha
Helix 13	AB4	A	255	263	Right-handed alpha
Helix 14	AB5	A	265	282	Right-handed alpha
Helix 15	AB6	A	284	286	Right-handed 310
Helix 16	AB7	A	303	325	Right-handed alpha
Helix 17	AB8	A	341	343	Right-handed 310
Helix 18	AB9	A	351	356	Right-handed alpha
Helix 19	AC1	A	356	367	Right-handed alpha
Helix 20	AC2	A	413	425	Right-handed alpha
Helix 21	AC3	A	501	508	Right-handed alpha
Helix 22	AC4	A	524	530	Right-handed alpha
Helix 23	AC5	A	534	551	Right-handed alpha
Helix 24	AC6	A	553	559	Right-handed alpha
Helix 25	AC7	A	561	566	Right-handed alpha
Helix 26	AC8	A	598	614	Right-handed alpha
Helix 27	AC9	A	632	650	Right-handed alpha
Helix 28	AD1	A	674	684	Right-handed alpha
Helix 29	AD2	A	703	713	Right-handed alpha
Helix 30	AD3	A	713	719	Right-handed alpha
Helix 31	AD4	A	724	735	Right-handed alpha
Helix 32	AD5	A	764	774	Right-handed alpha
Helix 33	AD6	B	45	49	Right-handed 310
Helix 34	AD7	B	57	63	Right-handed alpha
Helix 35	AD8	B	72	84	Right-handed alpha
Helix 36	AD9	B	95	110	Right-handed alpha
Helix 37	AE1	B	117	126	Right-handed alpha
Helix 38	AE2	B	138	147	Right-handed alpha
Helix 39	AE3	B	165	183	Right-handed alpha
Helix 40	AE4	C	51	70	Right-handed alpha
Helix 41	AE5	C	115	120	Right-handed alpha
Helix 42	AE6	C	124	129	Right-handed alpha
Helix 43	AE7	C	149	155	Right-handed alpha
Helix 44	AE8	C	205	220	Right-handed alpha
Helix 45	AE9	C	247	254	Right-handed alpha
Helix 46	AF1	C	280	285	Right-handed alpha
Helix 47	AF2	D	52	70	Right-handed alpha
Helix 48	AF3	D	115	120	Right-handed alpha
Helix 49	AF4	D	124	129	Right-handed alpha
Helix 50	AF5	D	149	158	Right-handed alpha
Helix 51	AF6	D	206	223	Right-handed alpha
Helix 52	AF7	D	249	254	Right-handed alpha
Helix 53	AF8	D	280	287	Right-handed alpha
Helix 54	AF9	E	20	36	Right-handed alpha
Helix 55	AG1	E	40	51	Right-handed alpha
Helix 56	AG2	E	70	74	Right-handed 310
Helix 57	AG3	E	76	81	Right-handed alpha
Helix 58	AG4	E	90	99	Right-handed alpha
Helix 59	AG5	E	104	111	Right-handed alpha
Helix 60	AG6	E	164	171	Right-handed alpha
Helix 61	AG7	E	171	179	Right-handed alpha
Helix 62	AG8	J	51	63	Right-handed alpha
Helix 63	AG9	J	72	83	Right-handed alpha
Helix 64	AH1	J	95	100	Right-handed alpha
Helix 65	AH2	J	100	108	Right-handed alpha
Helix 66	AH3	J	117	132	Right-handed alpha
Helix 67	AH4	J	150	155	Right-handed alpha
Helix 68	AH5	J	165	178	Right-handed alpha
Helix 69	AH6	K	52	62	Right-handed alpha
Helix 70	AH7	K	63	69	Right-handed alpha
Helix 71	AH8	K	115	120	Right-handed alpha
Helix 72	AH9	K	149	157	Right-handed alpha
Helix 73	AI1	K	206	223	Right-handed alpha
Helix 74	AI2	K	249	254	Right-handed alpha
Helix 75	AI3	K	267	272	Right-handed alpha
Helix 76	AI4	K	275	280	Right-handed alpha
Helix 77	AI5	K	280	287	Right-handed alpha
Helix 78	AI6	F	36	44	Right-handed alpha
Helix 79	AI7	F	51	60	Right-handed alpha
Helix 80	AI8	F	113	133	Right-handed alpha
Helix 81	AI9	F	160	169	Right-handed alpha
Helix 82	AJ1	F	179	185	Right-handed alpha
Helix 83	AJ2	F	204	207	Right-handed 310
Helix 84	AJ3	F	218	220	Right-handed 310
Helix 85	AJ4	F	256	262	Right-handed alpha
Helix 86	AJ5	F	284	297	Right-handed alpha
Helix 87	AJ6	F	298	304	Right-handed alpha
Helix 88	AJ7	F	317	324	Right-handed alpha
Helix 89	AJ8	F	340	344	Right-handed 310
Helix 90	AJ9	F	345	352	Right-handed 310
Helix 91	AK1	F	354	365	Right-handed alpha

There are 32 sheets in PDB entry 6O7I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	291	first strand
Strand 2	A	295	301	anti-parallel
Strand 3	A	231	241	anti-parallel
Strand 4	A	330	331	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	291	first strand
Strand 2	A	295	301	anti-parallel
Strand 3	A	231	241	anti-parallel
Strand 4	A	334	339	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	345	346	first strand
Strand 2	A	349	350	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	403	first strand
Strand 2	A	411	412	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	444	445	first strand
Strand 2	A	450	453	anti-parallel
Strand 3	A	431	435	anti-parallel
Strand 4	A	464	468	anti-parallel
Strand 5	A	481	485	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	580	585	first strand
Strand 2	A	590	594	anti-parallel
Strand 3	A	515	519	anti-parallel
Strand 4	A	624	627	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	672	673	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	50	first strand
Strand 2	C	141	148	anti-parallel
Strand 3	C	190	199	anti-parallel
Strand 4	C	8	17	anti-parallel
Strand 5	C	238	244	anti-parallel
Strand 6	C	260	262	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	88	first strand
Strand 2	C	99	101	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	104	first strand
Strand 2	C	109	110	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	171	first strand
Strand 2	C	178	183	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	143	first strand
Strand 2	D	191	200	anti-parallel
Strand 3	D	147	148	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	143	first strand
Strand 2	D	191	200	anti-parallel
Strand 3	D	7	17	anti-parallel
Strand 4	D	236	244	anti-parallel
Strand 5	D	260	261	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	88	first strand
Strand 2	D	99	101	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	104	first strand
Strand 2	D	109	110	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	168	first strand
Strand 2	D	181	186	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	61	first strand
Strand 2	E	155	161	anti-parallel
Strand 3	E	3	11	anti-parallel
Strand 4	E	195	203	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	68	first strand
Strand 2	E	101	103	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	124	132	first strand
Strand 2	E	143	151	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	251	254	first strand
Strand 2	E	211	214	anti-parallel
Strand 3	E	279	282	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	229	232	first strand
Strand 2	E	244	247	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	235	236	first strand
Strand 2	E	239	240	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	261	263	first strand
Strand 2	E	271	273	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	141	143	first strand
Strand 2	K	195	200	anti-parallel
Strand 3	K	7	16	anti-parallel
Strand 4	K	191	193	anti-parallel
Strand 5	K	147	148	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	141	143	first strand
Strand 2	K	195	200	anti-parallel
Strand 3	K	7	16	anti-parallel
Strand 4	K	238	244	anti-parallel
Strand 5	K	260	261	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	85	88	first strand
Strand 2	K	99	101	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	103	104	first strand
Strand 2	K	109	110	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	163	168	first strand
Strand 2	K	181	186	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	248	251	first strand
Strand 2	F	4	8	anti-parallel
Strand 3	F	393	396	anti-parallel
Strand 4	F	331	334	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	20	first strand
Strand 2	F	100	101	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	209	211	first strand
Strand 2	F	253	255	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	237	243	first strand
Strand 2	F	222	230	anti-parallel
Strand 3	F	383	386	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O7I

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7I