Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7K

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O7K entry

There are 25 chains in PDB entry 6O7K (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
5	ALA 1	LYS 71
f	ASP 382	ALA 890
g	A 2	U 1540
P	LYS 3	VAL 82
r	ARG 5	LEU 102
q	ARG 12	VAL 128
t	ALA 1	ALA 123
s	ALA 1	PRO 114
w	ALA 1	TRP 101
u	SER 1	ARG 88
y	MET 1	ALA 82
1	GLU 19	HIS 73
z	ARG 2	ARG 80
j	MET 8	SER 225
3	ASN 2	ALA 86
2	ILE 3	LYS 53
h	GLY 1	ILE 206
l	ALA 1	LYS 205
k	GLU 9	LYS 158
n	MET 1	SER 100
m	PRO 1	ALA 151
p	SER 1	ALA 129
o	ASN 3	ARG 129
v	C 1	A 77
N	A 13	G 18

There are103 helices in PDB entry 6O7K. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	5	37	43	Right-handed alpha
Helix 2	AA2	f	403	413	Right-handed alpha
Helix 3	AA3	f	420	424	Right-handed 310
Helix 4	AA4	f	448	450	Right-handed 310
Helix 5	AA5	f	451	462	Right-handed alpha
Helix 6	AA6	f	476	489	Right-handed alpha
Helix 7	AA7	f	506	514	Right-handed alpha
Helix 8	AA8	f	541	555	Right-handed alpha
Helix 9	AA9	f	646	667	Right-handed alpha
Helix 10	AB1	f	668	673	Right-handed alpha
Helix 11	AB2	f	673	679	Right-handed alpha
Helix 12	AB3	f	697	712	Right-handed alpha
Helix 13	AB4	f	729	740	Right-handed alpha
Helix 14	AB5	f	751	761	Right-handed alpha
Helix 15	AB6	f	770	786	Right-handed alpha
Helix 16	AB7	r	14	33	Right-handed alpha
Helix 17	AB8	r	80	88	Right-handed alpha
Helix 18	AB9	q	53	57	Right-handed 310
Helix 19	AC1	q	58	74	Right-handed alpha
Helix 20	AC2	q	75	77	Right-handed 310
Helix 21	AC3	q	92	103	Right-handed alpha
Helix 22	AC4	t	2	9	Right-handed alpha
Helix 23	AC5	s	13	21	Right-handed alpha
Helix 24	AC6	s	25	37	Right-handed alpha
Helix 25	AC7	s	48	60	Right-handed alpha
Helix 26	AC8	s	64	83	Right-handed alpha
Helix 27	AC9	s	84	93	Right-handed alpha
Helix 28	AD1	s	105	110	Right-handed alpha
Helix 29	AD2	w	2	15	Right-handed alpha
Helix 30	AD3	w	21	31	Right-handed alpha
Helix 31	AD4	w	42	47	Right-handed alpha
Helix 32	AD5	w	56	60	Right-handed 310
Helix 33	AD6	w	81	90	Right-handed alpha
Helix 34	AD7	u	3	15	Right-handed alpha
Helix 35	AD8	u	23	44	Right-handed alpha
Helix 36	AD9	u	48	73	Right-handed alpha
Helix 37	AE1	u	73	85	Right-handed alpha
Helix 38	AE2	y	53	63	Right-handed alpha
Helix 39	AE3	y	68	79	Right-handed alpha
Helix 40	AE4	1	24	29	Right-handed alpha
Helix 41	AE5	1	30	32	Right-handed 310
Helix 42	AE6	1	40	45	Right-handed alpha
Helix 43	AE7	1	47	64	Right-handed alpha
Helix 44	AE8	z	11	24	Right-handed alpha
Helix 45	AE9	z	40	44	Right-handed 310
Helix 46	AF1	z	62	68	Right-handed 310
Helix 47	AF2	z	69	74	Right-handed 310
Helix 48	AF3	j	23	28	Right-handed 310
Helix 49	AF4	j	33	37	Right-handed 310
Helix 50	AF5	j	41	62	Right-handed alpha
Helix 51	AF6	j	71	81	Right-handed alpha
Helix 52	AF7	j	102	123	Right-handed alpha
Helix 53	AF8	j	129	148	Right-handed alpha
Helix 54	AF9	j	149	154	Right-handed alpha
Helix 55	AG1	j	168	179	Right-handed alpha
Helix 56	AG2	j	205	223	Right-handed alpha
Helix 57	AG3	3	6	41	Right-handed alpha
Helix 58	AG4	3	42	64	Right-handed alpha
Helix 59	AG5	3	68	83	Right-handed alpha
Helix 60	AG6	2	8	12	Right-handed 310
Helix 61	AG7	2	16	24	Right-handed alpha
Helix 62	AG8	2	24	33	Right-handed alpha
Helix 63	AG9	2	39	44	Right-handed alpha
Helix 64	AH1	2	45	51	Right-handed alpha
Helix 65	AH2	h	5	10	Right-handed alpha
Helix 66	AH3	h	11	13	Right-handed 310
Helix 67	AH4	h	27	46	Right-handed alpha
Helix 68	AH5	h	71	77	Right-handed alpha
Helix 69	AH6	h	82	95	Right-handed alpha
Helix 70	AH7	h	107	110	Right-handed 310
Helix 71	AH8	h	111	126	Right-handed alpha
Helix 72	AH9	h	128	143	Right-handed alpha
Helix 73	AI1	h	156	159	Right-handed 310
Helix 74	AI2	l	6	15	Right-handed alpha
Helix 75	AI3	l	27	32	Right-handed alpha
Helix 76	AI4	l	48	65	Right-handed alpha
Helix 77	AI5	l	67	81	Right-handed alpha
Helix 78	AI6	l	84	95	Right-handed alpha
Helix 79	AI7	l	96	105	Right-handed alpha
Helix 80	AI8	l	109	119	Right-handed alpha
Helix 81	AI9	l	151	161	Right-handed alpha
Helix 82	AJ1	l	162	164	Right-handed 310
Helix 83	AJ2	l	195	205	Right-handed alpha
Helix 84	AJ3	k	54	66	Right-handed alpha
Helix 85	AJ4	k	109	118	Right-handed alpha
Helix 86	AJ5	k	131	146	Right-handed alpha
Helix 87	AJ6	k	148	156	Right-handed alpha
Helix 88	AJ7	n	12	16	Right-handed 310
Helix 89	AJ8	n	17	32	Right-handed alpha
Helix 90	AJ9	n	67	81	Right-handed alpha
Helix 91	AK1	m	19	30	Right-handed alpha
Helix 92	AK2	m	34	54	Right-handed alpha
Helix 93	AK3	m	56	68	Right-handed alpha
Helix 94	AK4	m	91	110	Right-handed alpha
Helix 95	AK5	m	114	128	Right-handed alpha
Helix 96	AK6	m	132	147	Right-handed alpha
Helix 97	AK7	p	4	20	Right-handed alpha
Helix 98	AK8	p	29	43	Right-handed alpha
Helix 99	AK9	p	112	119	Right-handed alpha
Helix 100	AL1	o	35	38	Right-handed 310
Helix 101	AL2	o	49	54	Right-handed alpha
Helix 102	AL3	o	70	86	Right-handed alpha
Helix 103	AL4	o	89	101	Right-handed alpha

There are 31 sheets in PDB entry 6O7K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	7	17	first strand
Strand 2	5	21	26	anti-parallel
Strand 3	5	31	36	anti-parallel
Strand 4	5	64	67	parallel
Strand 5	5	52	57	anti-parallel
Strand 6	5	7	17	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	388	389	first strand
Strand 2	f	558	559	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	429	434	first strand
Strand 2	f	439	444	anti-parallel
Strand 3	f	393	397	parallel
Strand 4	f	464	469	parallel
Strand 5	f	493	497	parallel
Strand 6	f	530	532	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	602	605	first strand
Strand 2	f	596	599	anti-parallel
Strand 3	f	640	644	anti-parallel
Strand 4	f	566	575	anti-parallel
Strand 5	f	579	586	anti-parallel
Strand 6	f	625	629	anti-parallel
Strand 7	f	608	610	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	717	720	first strand
Strand 2	f	688	695	parallel
Strand 3	f	724	725	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	717	720	first strand
Strand 2	f	688	695	parallel
Strand 3	f	742	745	parallel
Strand 4	f	765	767	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	850	851	first strand
Strand 2	f	835	847	anti-parallel
Strand 3	f	827	832	anti-parallel
Strand 4	f	876	884	anti-parallel
Strand 5	f	789	806	anti-parallel
Strand 6	f	810	823	anti-parallel
Strand 7	f	854	856	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	850	851	first strand
Strand 2	f	835	847	anti-parallel
Strand 3	f	860	865	anti-parallel
Strand 4	f	810	823	anti-parallel
Strand 5	f	854	856	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	15	16	first strand
Strand 2	P	19	29	anti-parallel
Strand 3	P	36	46	anti-parallel
Strand 4	P	72	78	parallel
Strand 5	P	57	62	anti-parallel
Strand 6	P	7	10	anti-parallel
Strand 7	P	19	29	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	r	45	52	first strand
Strand 2	r	62	73	anti-parallel
Strand 3	r	7	12	anti-parallel
Strand 4	r	97	101	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	r	45	52	first strand
Strand 2	r	62	73	anti-parallel
Strand 3	w	96	98	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	q	40	45	first strand
Strand 2	q	29	34	anti-parallel
Strand 3	q	17	24	anti-parallel
Strand 4	q	80	86	parallel
Strand 5	q	105	111	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	t	29	31	first strand
Strand 2	t	79	82	anti-parallel
Strand 3	t	95	96	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	t	36	39	first strand
Strand 2	t	49	55	anti-parallel
Strand 3	t	61	65	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	w	73	74	first strand
Strand 2	w	79	80	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	y	34	35	first strand
Strand 2	y	17	23	anti-parallel
Strand 3	y	2	8	anti-parallel
Strand 4	y	66	67	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	y	37	39	first strand
Strand 2	y	50	52	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	z	30	32	first strand
Strand 2	z	47	51	parallel
Strand 3	z	56	60	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	j	30	32	first strand
Strand 2	j	39	40	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	j	90	91	first strand
Strand 2	j	68	69	parallel
Strand 3	j	160	162	parallel
Strand 4	j	182	186	parallel
Strand 5	j	197	200	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	19	20	first strand
Strand 2	h	51	57	parallel
Strand 3	h	66	69	anti-parallel
Strand 4	h	101	104	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	163	170	first strand
Strand 2	h	147	154	anti-parallel
Strand 3	h	195	202	anti-parallel
Strand 4	h	181	188	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	l	127	128	first strand
Strand 2	l	122	124	anti-parallel
Strand 3	l	140	144	anti-parallel
Strand 4	l	178	181	anti-parallel
Strand 5	l	170	171	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	k	11	21	first strand
Strand 2	k	30	39	anti-parallel
Strand 3	k	45	52	anti-parallel
Strand 4	k	70	71	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	k	84	88	first strand
Strand 2	k	91	96	anti-parallel
Strand 3	k	122	128	anti-parallel
Strand 4	k	104	105	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	n	35	44	first strand
Strand 2	n	58	66	anti-parallel
Strand 3	n	2	10	anti-parallel
Strand 4	n	84	88	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	m	72	76	first strand
Strand 2	m	85	89	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	23	27	first strand
Strand 2	p	57	61	anti-parallel
Strand 3	p	47	51	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	73	76	first strand
Strand 2	p	122	129	anti-parallel
Strand 3	p	85	86	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	73	76	first strand
Strand 2	p	122	129	anti-parallel
Strand 3	p	100	105	anti-parallel
Strand 4	p	108	111	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	o	5	7	first strand
Strand 2	o	15	22	anti-parallel
Strand 3	o	60	67	anti-parallel
Strand 4	o	27	29	parallel
Strand 5	o	32	33	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O7K

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7K