Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O7T entry

There are 15 chains in PDB entry 6O7T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
a	LYS 4	ALA 830
b	ILE 214	TYR 251
c	HIS 19	GLN 213
d	GLY 3	TYR 345
f	TRP 11	VAL 73
g	MET 1	THR 155
h	THR 2	CYS 160
i	THR 2	VAL 159
j	THR 2	VAL 159
k	THR 2	VAL 159
l	THR 2	ASP 157
m	THR 2	VAL 159
n	THR 2	VAL 159
o	SER 7	GLY 162
e	PHE 4	LEU 67

There are105 helices in PDB entry 6O7T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	a	28	35	Right-handed alpha
Helix 2	AA2	a	55	58	Right-handed 310
Helix 3	AA3	a	59	79	Right-handed alpha
Helix 4	AA4	a	87	93	Right-handed alpha
Helix 5	AA5	a	105	145	Right-handed alpha
Helix 6	AA6	a	195	207	Right-handed alpha
Helix 7	AA7	a	242	256	Right-handed alpha
Helix 8	AA8	a	266	304	Right-handed alpha
Helix 9	AA9	a	307	325	Right-handed alpha
Helix 10	AB1	a	345	359	Right-handed alpha
Helix 11	AB2	a	387	392	Right-handed alpha
Helix 12	AB3	a	410	424	Right-handed alpha
Helix 13	AB4	a	425	442	Right-handed alpha
Helix 14	AB5	a	452	461	Right-handed alpha
Helix 15	AB6	a	462	479	Right-handed alpha
Helix 16	AB7	a	519	523	Right-handed 310
Helix 17	AB8	a	527	560	Right-handed alpha
Helix 18	AB9	a	564	583	Right-handed alpha
Helix 19	AC1	a	583	595	Right-handed alpha
Helix 20	AC2	a	607	613	Right-handed alpha
Helix 21	AC3	a	630	655	Right-handed alpha
Helix 22	AC4	a	710	730	Right-handed alpha
Helix 23	AC5	a	731	733	Right-handed 310
Helix 24	AC6	a	734	753	Right-handed alpha
Helix 25	AC7	a	755	759	Right-handed 310
Helix 26	AC8	a	765	786	Right-handed alpha
Helix 27	AC9	a	787	803	Right-handed alpha
Helix 28	AD1	b	220	250	Right-handed alpha
Helix 29	AD2	c	24	39	Right-handed alpha
Helix 30	AD3	c	41	45	Right-handed 310
Helix 31	AD4	c	46	54	Right-handed alpha
Helix 32	AD5	c	55	89	Right-handed alpha
Helix 33	AD6	c	93	97	Right-handed 310
Helix 34	AD7	c	104	123	Right-handed alpha
Helix 35	AD8	c	135	168	Right-handed alpha
Helix 36	AD9	c	180	206	Right-handed alpha
Helix 37	AE1	d	10	21	Right-handed alpha
Helix 38	AE2	d	27	32	Right-handed alpha
Helix 39	AE3	d	38	47	Right-handed alpha
Helix 40	AE4	d	64	85	Right-handed alpha
Helix 41	AE5	d	91	115	Right-handed alpha
Helix 42	AE6	d	119	127	Right-handed alpha
Helix 43	AE7	d	144	152	Right-handed alpha
Helix 44	AE8	d	177	194	Right-handed alpha
Helix 45	AE9	d	201	228	Right-handed alpha
Helix 46	AF1	d	251	258	Right-handed alpha
Helix 47	AF2	d	261	269	Right-handed alpha
Helix 48	AF3	d	288	298	Right-handed alpha
Helix 49	AF4	d	306	332	Right-handed alpha
Helix 50	AF5	f	12	33	Right-handed alpha
Helix 51	AF6	f	47	70	Right-handed alpha
Helix 52	AF7	g	8	43	Right-handed alpha
Helix 53	AF8	g	46	50	Right-handed 310
Helix 54	AF9	g	54	76	Right-handed alpha
Helix 55	AG1	g	83	119	Right-handed alpha
Helix 56	AG2	g	124	152	Right-handed alpha
Helix 57	AG3	h	8	42	Right-handed alpha
Helix 58	AG4	h	54	74	Right-handed alpha
Helix 59	AG5	h	83	119	Right-handed alpha
Helix 60	AG6	h	120	121	Right-handed 310
Helix 61	AG7	h	122	124	Right-handed 310
Helix 62	AG8	h	125	153	Right-handed alpha
Helix 63	AG9	i	8	18	Right-handed alpha
Helix 64	AH1	i	18	44	Right-handed alpha
Helix 65	AH2	i	54	74	Right-handed alpha
Helix 66	AH3	i	84	118	Right-handed alpha
Helix 67	AH4	i	126	151	Right-handed alpha
Helix 68	AH5	j	13	37	Right-handed alpha
Helix 69	AH6	j	54	75	Right-handed alpha
Helix 70	AH7	j	76	78	Right-handed 310
Helix 71	AH8	j	83	115	Right-handed alpha
Helix 72	AH9	j	125	156	Right-handed alpha
Helix 73	AI1	k	8	34	Right-handed alpha
Helix 74	AI2	k	35	37	Right-handed 310
Helix 75	AI3	k	38	46	Right-handed alpha
Helix 76	AI4	k	47	52	Right-handed 310
Helix 77	AI5	k	53	75	Right-handed alpha
Helix 78	AI6	k	76	78	Right-handed 310
Helix 79	AI7	k	84	118	Right-handed alpha
Helix 80	AI8	k	119	122	Right-handed 310
Helix 81	AI9	k	127	155	Right-handed alpha
Helix 82	AJ1	l	8	40	Right-handed alpha
Helix 83	AJ2	l	46	50	Right-handed 310
Helix 84	AJ3	l	54	75	Right-handed alpha
Helix 85	AJ4	l	76	78	Right-handed 310
Helix 86	AJ5	l	84	119	Right-handed alpha
Helix 87	AJ6	l	124	154	Right-handed alpha
Helix 88	AJ7	m	8	42	Right-handed alpha
Helix 89	AJ8	m	54	76	Right-handed alpha
Helix 90	AJ9	m	83	122	Right-handed alpha
Helix 91	AK1	m	125	151	Right-handed alpha
Helix 92	AK2	m	152	154	Right-handed 310
Helix 93	AK3	n	9	40	Right-handed alpha
Helix 94	AK4	n	56	78	Right-handed alpha
Helix 95	AK5	n	83	116	Right-handed alpha
Helix 96	AK6	n	117	124	Right-handed 310
Helix 97	AK7	n	125	133	Right-handed alpha
Helix 98	AK8	n	134	151	Right-handed alpha
Helix 99	AK9	n	152	154	Right-handed 310
Helix 100	AL1	o	16	46	Right-handed alpha
Helix 101	AL2	o	60	80	Right-handed alpha
Helix 102	AL3	o	91	124	Right-handed alpha
Helix 103	AL4	o	133	162	Right-handed alpha
Helix 104	AL5	e	5	24	Right-handed alpha
Helix 105	AL6	e	29	54	Right-handed alpha

There are 5 sheets in PDB entry 6O7T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	40	41	first strand
Strand 2	a	339	342	anti-parallel
Strand 3	a	14	22	anti-parallel
Strand 4	a	334	336	anti-parallel
Strand 5	a	327	328	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	40	41	first strand
Strand 2	a	339	342	anti-parallel
Strand 3	a	14	22	anti-parallel
Strand 4	a	368	370	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	187	191	first strand
Strand 2	a	234	239	anti-parallel
Strand 3	a	212	217	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	494	495	first strand
Strand 2	a	509	510	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	506	507	first strand
Strand 2	e	63	64	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O7T

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7T