Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O7U entry

There are 15 chains in PDB entry 6O7U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
a	GLU 4	ILE 888
b	ILE 214	SER 257
c	PHE 17	GLN 213
d	GLY 3	TYR 345
e	PHE 4	LEU 67
f	CYS 12	GLN 72
g	LEU 4	GLN 156
h	GLU 3	VAL 159
i	GLU 3	VAL 159
j	LEU 4	VAL 159
k	THR 2	VAL 159
l	GLU 3	VAL 159
m	GLU 3	CYS 160
n	GLU 3	CYS 160
o	ASN 8	SER 163

There are113 helices in PDB entry 6O7U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	a	24	36	Right-handed alpha
Helix 2	AA2	a	57	78	Right-handed alpha
Helix 3	AA3	a	112	118	Right-handed alpha
Helix 4	AA4	a	118	164	Right-handed alpha
Helix 5	AA5	a	248	260	Right-handed alpha
Helix 6	AA6	a	296	305	Right-handed alpha
Helix 7	AA7	a	320	352	Right-handed alpha
Helix 8	AA8	a	353	372	Right-handed alpha
Helix 9	AA9	a	388	390	Right-handed 310
Helix 10	AB1	a	391	406	Right-handed alpha
Helix 11	AB2	a	433	444	Right-handed alpha
Helix 12	AB3	a	456	469	Right-handed alpha
Helix 13	AB4	a	471	488	Right-handed alpha
Helix 14	AB5	a	488	494	Right-handed alpha
Helix 15	AB6	a	498	507	Right-handed alpha
Helix 16	AB7	a	507	525	Right-handed alpha
Helix 17	AB8	a	565	569	Right-handed 310
Helix 18	AB9	a	573	598	Right-handed alpha
Helix 19	AC1	a	598	608	Right-handed alpha
Helix 20	AC2	a	610	626	Right-handed alpha
Helix 21	AC3	a	628	642	Right-handed alpha
Helix 22	AC4	a	654	664	Right-handed alpha
Helix 23	AC5	a	675	689	Right-handed alpha
Helix 24	AC6	a	689	703	Right-handed alpha
Helix 25	AC7	a	704	707	Right-handed 310
Helix 26	AC8	a	767	791	Right-handed alpha
Helix 27	AC9	a	794	815	Right-handed alpha
Helix 28	AD1	a	826	847	Right-handed alpha
Helix 29	AD2	a	852	866	Right-handed alpha
Helix 30	AD3	a	884	888	Right-handed 310
Helix 31	AD4	b	222	246	Right-handed alpha
Helix 32	AD5	b	250	254	Right-handed 310
Helix 33	AD6	c	18	39	Right-handed alpha
Helix 34	AD7	c	41	45	Right-handed 310
Helix 35	AD8	c	46	54	Right-handed alpha
Helix 36	AD9	c	55	90	Right-handed alpha
Helix 37	AE1	c	93	97	Right-handed 310
Helix 38	AE2	c	98	100	Right-handed 310
Helix 39	AE3	c	101	123	Right-handed alpha
Helix 40	AE4	c	135	177	Right-handed alpha
Helix 41	AE5	c	180	192	Right-handed alpha
Helix 42	AE6	c	192	206	Right-handed alpha
Helix 43	AE7	d	5	9	Right-handed 310
Helix 44	AE8	d	10	22	Right-handed alpha
Helix 45	AE9	d	26	35	Right-handed alpha
Helix 46	AF1	d	38	47	Right-handed alpha
Helix 47	AF2	d	64	86	Right-handed alpha
Helix 48	AF3	d	89	111	Right-handed alpha
Helix 49	AF4	d	136	141	Right-handed 310
Helix 50	AF5	d	145	150	Right-handed alpha
Helix 51	AF6	d	158	162	Right-handed 310
Helix 52	AF7	d	173	200	Right-handed alpha
Helix 53	AF8	d	202	227	Right-handed alpha
Helix 54	AF9	d	234	239	Right-handed alpha
Helix 55	AG1	d	248	258	Right-handed alpha
Helix 56	AG2	d	261	267	Right-handed alpha
Helix 57	AG3	d	283	298	Right-handed alpha
Helix 58	AG4	d	306	330	Right-handed alpha
Helix 59	AG5	e	5	23	Right-handed alpha
Helix 60	AG6	e	29	54	Right-handed alpha
Helix 61	AG7	f	13	33	Right-handed alpha
Helix 62	AG8	f	47	71	Right-handed alpha
Helix 63	AG9	g	9	43	Right-handed alpha
Helix 64	AH1	g	44	45	Right-handed 310
Helix 65	AH2	g	46	50	Right-handed 310
Helix 66	AH3	g	54	76	Right-handed alpha
Helix 67	AH4	g	83	122	Right-handed alpha
Helix 68	AH5	g	124	153	Right-handed alpha
Helix 69	AH6	h	9	43	Right-handed alpha
Helix 70	AH7	h	46	50	Right-handed 310
Helix 71	AH8	h	54	76	Right-handed alpha
Helix 72	AH9	h	83	117	Right-handed alpha
Helix 73	AI1	h	124	155	Right-handed alpha
Helix 74	AI2	i	8	43	Right-handed alpha
Helix 75	AI3	i	46	50	Right-handed 310
Helix 76	AI4	i	54	75	Right-handed alpha
Helix 77	AI5	i	76	78	Right-handed 310
Helix 78	AI6	i	83	119	Right-handed alpha
Helix 79	AI7	i	124	152	Right-handed alpha
Helix 80	AI8	j	8	43	Right-handed alpha
Helix 81	AI9	j	54	76	Right-handed alpha
Helix 82	AJ1	j	83	117	Right-handed alpha
Helix 83	AJ2	j	122	124	Right-handed 310
Helix 84	AJ3	j	125	152	Right-handed alpha
Helix 85	AJ4	k	8	42	Right-handed alpha
Helix 86	AJ5	k	54	76	Right-handed alpha
Helix 87	AJ6	k	83	119	Right-handed alpha
Helix 88	AJ7	k	122	124	Right-handed 310
Helix 89	AJ8	k	125	151	Right-handed alpha
Helix 90	AJ9	k	152	154	Right-handed 310
Helix 91	AK1	l	9	43	Right-handed alpha
Helix 92	AK2	l	46	50	Right-handed 310
Helix 93	AK3	l	54	74	Right-handed alpha
Helix 94	AK4	l	75	78	Right-handed 310
Helix 95	AK5	l	83	117	Right-handed alpha
Helix 96	AK6	l	122	124	Right-handed 310
Helix 97	AK7	l	125	152	Right-handed alpha
Helix 98	AK8	m	8	40	Right-handed alpha
Helix 99	AK9	m	46	50	Right-handed 310
Helix 100	AL1	m	54	76	Right-handed alpha
Helix 101	AL2	m	83	117	Right-handed alpha
Helix 102	AL3	m	122	124	Right-handed 310
Helix 103	AL4	m	125	152	Right-handed alpha
Helix 104	AL5	n	9	43	Right-handed alpha
Helix 105	AL6	n	46	50	Right-handed 310
Helix 106	AL7	n	54	76	Right-handed alpha
Helix 107	AL8	n	83	120	Right-handed alpha
Helix 108	AL9	n	124	152	Right-handed alpha
Helix 109	AM1	o	14	48	Right-handed alpha
Helix 110	AM2	o	52	56	Right-handed 310
Helix 111	AM3	o	60	82	Right-handed alpha
Helix 112	AM4	o	91	128	Right-handed alpha
Helix 113	AM5	o	133	162	Right-handed alpha

There are 4 sheets in PDB entry 6O7U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	39	40	first strand
Strand 2	a	380	386	anti-parallel
Strand 3	a	16	21	anti-parallel
Strand 4	a	415	416	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	267	270	first strand
Strand 2	a	284	288	anti-parallel
Strand 3	a	241	245	anti-parallel
Strand 4	a	310	311	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	540	541	first strand
Strand 2	a	555	556	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	552	553	first strand
Strand 2	e	63	64	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O7U

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O7U